Gene detail

Detail information of GWHGAAEX005750/evm.TU.scaffold_17.102

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|702498343\|ref\|XP_010037680.1\|	1.69E-99	PREDICTED: uncharacterized protein At5g01610-like [Eucalyptus grandis]
Swissprot	tr\|Q9M015\|Y5161_ARATH	2.00E-91	Uncharacterized protein At5g01610
trEMBL	tr\|A0A059A5T1\|A0A059A5T1_EUCGR	6.00E-100	Uncharacterized protein {ECO:0000313\|EMBL:KCW49422.1}
TAIR	AT3G08890	1.00E-96	Protein of unknown function, DUF538

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000018	3366232	3376350	-

Transcript Sequence
>GWHTAAEX005750 TATAAGTTTTACATCATATATATAATTAAAGTACTAAATTGGTAATAAAAGGATGTAACTATCCATTCTTTTGATTGATTTGGTTTGTGTAGAGCCACGTCTGTCGTCTCTTGTCACGTTCCTCGCTGCACGAACGCTACATAGTCGTAAAGCGAAAGTAATGCACTTCCATTAAATACGACCCGCCACTGCTGGTTGGAAAGTCGCTGTACAGCCACCGAACGCGGCGCACATTTCTTCCTTTTTCCCCGAAATATTTTCTTCGGCGAGCGGAAAAAGGGAAGGTAGGAAGCTTTGGATCTGAGAATTCGATTCAAGGGTAGGTGGAGATGGATCAGATATTGAACAAGGTAGGTGGTTATTGGTTCTCAAGAACAGCCAATAAGGAGATCTCTTCCGTTGGGGATGATATCAATTCTCTTTCAAGCAGCATCGAGGGGGGAGCAAAATGGCTGGTGAACAAGCTCAAAGGCAAGATGCAGAAGCCTTTGCCAGAGCTGCTGCAGGAGTACGACCTTCCGGTGGGCATCTTTCCTCGGGACGCCACCAACTACGAGTTCAACATGGAAACTATGAGGCTCACCGTCTTCATACCCTCGCCGTGCGAGGTCGGCTACAAGGATTCCTCCATGCTCAGGTTTCACACCAGCGTCACCGGCTATCTTGAGAAAGGGAGGCTGTCCGACTTGGAGGGCATGAAGACCAAAGTCATTGTCTGGGCGAGGGTCACGTCCATATCCACCCAAGGCTCCAAGGTCTGCTTCAACGCCGGCATGAAGAAAAGCAGGCCCAGAGATGCCTATGAGGTTCTCAGGGACGGCGTTCTCGTCGACAAGTTTTAATCGAGGTTCTTCCATTCCTCTCCCTTGCATTTTTATTTTTTTTGCTGCGCTACAAGGTAGTGTGAATTCCTTCTGCCTGTTTCTTCTGCTGCATTCTTTGTATAGTTTGCAGCCAAGTCATATCAGTTTGAATAGTCCATTTGATGTAGTATATTTTGCCTGTTGAAAAGCATGCTAATGATTGCACTCTCCCTGAGCTTGAGCGACGTCTTATTTGCCTAAAGTAAATGAGACAGCTCCTTATGTCAAGGCTCGGGCTTTGTTTGTCACTATTGATTATGACTGTAGCAGCATCGTAGCAAAACTATGCATATAATGTTGGGTTTAGGTCTCCTCACATGTAATACATATAAAAGCATCTAGTGAGGTCCGGGTCCGGATAGGGTTAGCCTGTTGGGCGAAATGAACTGTAATGTGGGCATGTCTGGCTATCAAGCTCATGTATCCATCCATGTGTATCATATCAATGATATGCTGAACCAACAACAGATTTACGATTTTCAGGAGATGATCATTTCAATAGGAGACATACATTTGGAGTATAGCTGAATTCAGCAGTAATTTATTCGATAGCTGTATGTGAATGACTAATACATAGCTTTTCATTTAAGCAATTTATTGGAATGTCTCTCGTATGATGAATGATTAATGAATGTAACATTTTTGCTCTTTTATTTAAGTTTAAAACTTTATAATTTTTAGCATTTATTTTATTCTTTTTTTGTTCTCAT

Network for GWHGAAEX005750

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04398.11	DUF538	56	159	1.70E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	64.750
SRP064423	SRR2545915	Juvenile tuber	76.110
SRP108465	SRR5643513	five period of Gastrodia elata	61.170
	SRR5643514	five period of Gastrodia elata	54.910
	SRR5643515	five period of Gastrodia elata	66.700
	SRR5643524	five period of Gastrodia elata	61.050
	SRR5643525	five period of Gastrodia elata	365.420
	SRR5643528	five period of Gastrodia elata	254.620
	SRR5643658	five period of Gastrodia elata	326.460
	SRR5643659	five period of Gastrodia elata	67.390
	SRR5643660	five period of Gastrodia elata	59.370
	SRR5643661	five period of Gastrodia elata	70.770
	SRR5643662	five period of Gastrodia elata	89.390
	SRR5643663	five period of Gastrodia elata	100.260
	SRR5643664	five period of Gastrodia elata	82.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.740
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	34.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.780
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.840
SRP279888	Gastro	Gastrodia elata tuber	59.18
	Juven	Juvenile tuber	43.91
	Mother_Gastro	Mother tuber of Gastrodia elata	178.15
	Mother_Juven	Mother tuber of Juvenile	70.33