Detail information of GWHGAAEX005760/evm.TU.scaffold_17.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG14710Phosphatidylinositol transfer protein SEC14 and related proteins
nrgi|743782061|ref|XP_010921052.1|0PREDICTED: LOW QUALITY PROTEIN: patellin-6-like [Elaeis guineensis]
Swissprottr|Q9SCU1|PATL6_ARATH0Patellin-6
trEMBLtr|M0S983|M0S983_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18920_001}
TAIRAT3G516700SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001844999384502377+
Transcript Sequence

Network for GWHGAAEX005760

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03765.14CRAL_TRIO_N551054.50E-07
PF00650.19CRAL_TRIO1292901.50E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.570
SRR2545915Juvenile tuber6.940
SRP108465SRR5643513five period of Gastrodia elata13.680
SRR5643514five period of Gastrodia elata13.350
SRR5643515five period of Gastrodia elata12.920
SRR5643524five period of Gastrodia elata10.550
SRR5643525five period of Gastrodia elata7.570
SRR5643528five period of Gastrodia elata6.030
SRR5643658five period of Gastrodia elata5.340
SRR5643659five period of Gastrodia elata21.700
SRR5643660five period of Gastrodia elata12.030
SRR5643661five period of Gastrodia elata14.820
SRR5643662five period of Gastrodia elata17.780
SRR5643663five period of Gastrodia elata17.560
SRR5643664five period of Gastrodia elata16.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.720
SRR6049655Rhizomagastrodiae_C368-T10_good_18.090
SRR6049656Rhizomagastrodiae_C368-T07_good_19.000
SRR6049657Rhizomagastrodiae_C368-T07_good_110.150
SRR6049658Rhizomagastrodiae_C368-T04_good_15.150
SRR6049659Rhizomagastrodiae_C368-T04_good_13.850
SRR6049660Rhizomagastrodiae_C368-T01_good_17.820
SRR6049661Rhizomagastrodiae_C368-T04_good_114.230
SRR6049662Rhizomagastrodiae_C368-T01_good_132.550
SRR6049663Rhizomagastrodiae_C368-T01_good_114.940
SRR6049664Rhizomagastrodiae_C368-T10_good_111.640
SRR6049665Rhizomagastrodiae_C368-T10_good_111.640
SRP279888GastroGastrodia elata tuber 6.92
JuvenJuvenile tuber3.31
Mother_GastroMother tuber of Gastrodia elata 5.49
Mother_JuvenMother tuber of Juvenile 3.79