Detail information of GWHGAAEX005761/evm.TU.scaffold_17.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|404497032|ref|YP_006721138.1|2.00E-06SAM-dependent methyltransferase [Geobacter metallireducens GS-15]
nrgi|743843038|ref|XP_010937964.1|0PREDICTED: uncharacterized protein LOC105057170 [Elaeis guineensis]
trEMBLtr|M0TC68|M0TC68_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P32740_001}
TAIRAT5G017100methyltransferases

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001845058344508102-
Transcript Sequence

Network for GWHGAAEX005761

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08241.11Methyltransf_111451985.50E-10
PF05050.11Methyltransf_213254790.00018
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.500
SRR2545915Juvenile tuber17.610
SRP108465SRR5643513five period of Gastrodia elata28.570
SRR5643514five period of Gastrodia elata21.690
SRR5643515five period of Gastrodia elata34.390
SRR5643524five period of Gastrodia elata18.340
SRR5643525five period of Gastrodia elata38.290
SRR5643528five period of Gastrodia elata25.660
SRR5643658five period of Gastrodia elata30.890
SRR5643659five period of Gastrodia elata43.860
SRR5643660five period of Gastrodia elata26.510
SRR5643661five period of Gastrodia elata29.380
SRR5643662five period of Gastrodia elata27.870
SRR5643663five period of Gastrodia elata29.370
SRR5643664five period of Gastrodia elata55.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.790
SRR6049655Rhizomagastrodiae_C368-T10_good_122.590
SRR6049656Rhizomagastrodiae_C368-T07_good_131.680
SRR6049657Rhizomagastrodiae_C368-T07_good_138.050
SRR6049658Rhizomagastrodiae_C368-T04_good_121.920
SRR6049659Rhizomagastrodiae_C368-T04_good_127.700
SRR6049660Rhizomagastrodiae_C368-T01_good_138.340
SRR6049661Rhizomagastrodiae_C368-T04_good_123.810
SRR6049662Rhizomagastrodiae_C368-T01_good_125.610
SRR6049663Rhizomagastrodiae_C368-T01_good_135.020
SRR6049664Rhizomagastrodiae_C368-T10_good_124.290
SRR6049665Rhizomagastrodiae_C368-T10_good_124.290
SRP279888GastroGastrodia elata tuber 28.02
JuvenJuvenile tuber10.68
Mother_GastroMother tuber of Gastrodia elata 34.63
Mother_JuvenMother tuber of Juvenile 15.71