Detail information of GWHGAAEX005771/evm.TU.scaffold_17.145
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672118801|ref|XP_008782621.1| | 2.70E-135 | PREDICTED: peroxidase P7-like [Phoenix dactylifera] |
| Swissprot | tr|P22195|PER1_ARAHY | 7.00E-115 | Cationic peroxidase 1 (Precursor) |
| trEMBL | tr|J3MP43|J3MP43_ORYBR | 8.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G31750.1} |
| TAIR | AT5G05340 | 6.00E-111 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000018 | 5367904 | 5369794 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005771
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 46 | 288 | 4.80E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.790 |
| SRR2545915 | Juvenile tuber | 7.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.500 |
| SRR5643514 | five period of Gastrodia elata | 5.240 | |
| SRR5643515 | five period of Gastrodia elata | 4.130 | |
| SRR5643524 | five period of Gastrodia elata | 4.100 | |
| SRR5643525 | five period of Gastrodia elata | 0.840 | |
| SRR5643528 | five period of Gastrodia elata | 0.930 | |
| SRR5643658 | five period of Gastrodia elata | 0.850 | |
| SRR5643659 | five period of Gastrodia elata | 4.160 | |
| SRR5643660 | five period of Gastrodia elata | 2.880 | |
| SRR5643661 | five period of Gastrodia elata | 4.850 | |
| SRR5643662 | five period of Gastrodia elata | 1.240 | |
| SRR5643663 | five period of Gastrodia elata | 1.220 | |
| SRR5643664 | five period of Gastrodia elata | 1.150 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.780 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.410 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.910 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.620 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 18.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.870 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.200 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.200 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.58 |
| Juven | Juvenile tuber | 2.10 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.76 | |
| Mother_Juven | Mother tuber of Juvenile | 7.65 |