Detail information of GWHGAAEX005773/evm.TU.scaffold_17.147


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695025316|ref|XP_009399908.1|8.00E-81PREDICTED: LOB domain-containing protein 15-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9AT61|LBD13_ARATH2.00E-71LOB domain-containing protein 13
trEMBLtr|M0SWH5|M0SWH5_MUSAM1.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P07460_001}
TAIRAT2G303408.00E-71LOB domain-containing protein 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001854312145432386-
Transcript Sequence

Network for GWHGAAEX005773

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB191164.30E-40
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.230
SRR2545915Juvenile tuber6.830
SRP108465SRR5643513five period of Gastrodia elata5.980
SRR5643514five period of Gastrodia elata7.170
SRR5643515five period of Gastrodia elata4.160
SRR5643524five period of Gastrodia elata7.390
SRR5643525five period of Gastrodia elata2.200
SRR5643528five period of Gastrodia elata0.160
SRR5643658five period of Gastrodia elata0.300
SRR5643659five period of Gastrodia elata0.650
SRR5643660five period of Gastrodia elata0.140
SRR5643661five period of Gastrodia elata0.510
SRR5643662five period of Gastrodia elata0.360
SRR5643663five period of Gastrodia elata0.220
SRR5643664five period of Gastrodia elata0.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.570
SRR6049655Rhizomagastrodiae_C368-T10_good_113.430
SRR6049656Rhizomagastrodiae_C368-T07_good_111.720
SRR6049657Rhizomagastrodiae_C368-T07_good_18.040
SRR6049658Rhizomagastrodiae_C368-T04_good_14.840
SRR6049659Rhizomagastrodiae_C368-T04_good_11.850
SRR6049660Rhizomagastrodiae_C368-T01_good_15.470
SRR6049661Rhizomagastrodiae_C368-T04_good_111.480
SRR6049662Rhizomagastrodiae_C368-T01_good_16.030
SRR6049663Rhizomagastrodiae_C368-T01_good_14.320
SRR6049664Rhizomagastrodiae_C368-T10_good_17.600
SRR6049665Rhizomagastrodiae_C368-T10_good_17.600
SRP279888GastroGastrodia elata tuber 0.09
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 20.56
Mother_JuvenMother tuber of Juvenile 6.50