Gene detail

Detail information of GWHGAAEX005781/evm.TU.scaffold_17.164

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|15642072\|ref\|NP_231704.1\|	1.00E-134	peptidase insulinase family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
KOG	KOG0959	0	N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily
nr	gi\|672118858\|ref\|XP_008782651.1\|	0	PREDICTED: nardilysin [Phoenix dactylifera]
Swissprot	tr\|O22941\|PXM16_ARATH	8.00E-166	Zinc-metallopeptidase, peroxisomal
trEMBL	tr\|M0TXI9\|M0TXI9_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P04800_001}
TAIR	AT1G06900	0	Insulinase (Peptidase family M16) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000018	5847414	5956574	-

Transcript Sequence
>GWHTAAEX005781 GCCCTACATAGCATTTGGGCACCCTGGTTCGCATAATACGGGTAGTGGCTACACTAGCAGCAGTCGCTGGCGGCCGCTTGCTCTCGACTTAGCTGATTAATAGAGAGACGGAGAGGTTTCGGAAATGGTGGTTCATTCTCTGAACGACGTGGTTATAAAGTCCCCGACGGATCGGCGATCATATCGAATACTCCATCTCCCAAATGGCCTCACAGCTGTTCTTATTCATGACCCAGACATATTCTCTGATGGCACTCAGCCGGGGGAATCCGAAGCGGATTTGCAAACCCGTGGCTTAGATTCAGACGATGACGACATGGAGGACGATGGCAATGACTGCGAGGACGACAAAGAGGATTGTTACACCGAAGACGAAGAGAAGGATGAGGAAGATGATGAGGCTGGATGCAAGTGCGATGGGCGGACGAAGAAGGGCGCCTCTCTCACCAAAAAGGCTGCTGCTGCAATGTGTGTCGGAATGGGAAGCTTCTCTGATCCTGATAAGGCACAGGGTCTTGCACATTTTCTAGAGCACATGCTTTTCATGGGGAGCTCTGAATTTCCAGATGAAAATGAGTATGATGGGTACCTTTCGAAGCATGGAGGTTCTTCAAATGCTTACACTGAAACCGAGTACACTTGCTACCACTTTGAAGTTAATCATGAGTATCTCAAAGGAGCTTTAGAAAGATTTTCCCAATTTTTTATATCGCCGTTAATTAAGGCAGATGCTATGGATCGGGAGGTCTTAGCAGTTGATTCAGAGTTCAACCAAATTCTCCAAAGTGATAGCTGCCGCCTTCTGCAGCTTACCTGTCATACATCTACACTTGGTCACCCTTTTAACAGATTTTTCTGGGGAAATAAAAAAAGCTTGGCTGATGCAATGGAAAATGGAGTAAATCTGCGGGAAGAAATCTTGCTAATGTACAATAGAAATTATCTTGGGAGCATAATGAAATTAGTGGTTATTGGAGGAGAGCCACTTGACATCCTTGAGAAATGGGTGATAGAACTTTTCAGTCAAGTTAGAAACGGAACTCCAGTGAGGGCTATTGCTGAATGTGATACTCCTATATGGCAGCCTGGTAAACTTTACAGATTAGAAGCTGTTAAAGATGTTCATGCGCTAGATTTGTCATGGACATTACCATGCCTTCACAAGGAGTATCTAAAAAAACCAGAGGATTACTTGGCACATCTTTTGGGGCATGAGGGCAGTGGAAGCTTACTTTTTTCCCTTAAAGCCAAAGGTTGGGCAACATCTTTATCTGCTGGTGTTGGTGATGAAGGCATGCGCCGTTCTTCCATTGCTTATGTGTTTGTTATGTCAATAAATTTGACAGATTCTGGAGTAGAAAGGATATATGATATCATTGGATTTGTGTATCAATACATTAAATTGCTTCGTGAGTCTGCTCCCCCGGACTGGATTTTCAAGGAACTGCAAGACATAGGAAACATGGAATTCAGATTTGTTGATGAGCAGCCTCAGGATGAGTATGCAGTAGGCCTAGCAGAGAATTTACTCTTTTATTCTGAGGAGCATATAATTTATGGAGAATATGCTTTCGAGCTGTGGGATCCGAATTTGATAAAATATGTCCTGACTTTTTTCTCTCCAGAAAACATGAGGGTCGACTTGTTATCAAAGTCTTTTAATAAGGAGTCACAGGGCTGCTTATGTGAGCCATGGTTTGGAACTTCATATGTTGAGGAAGACATCCCCTCTTCCGTTCTTGAACTTTGGAATGATCCTGCTATAATAGATCCATCATTGCACTTACCATTGAAGAATGAGTTTATCCCTGAGGATTTTTCCCTTTGCAATACAAACATGAAACATAATTCTAAGGATTACTATTATCCAAAGTGCATCATTGACAACCCTTTAATTAAGTTATGGCACAAAGTTGACCTCACTTTCAATGTTCCTAGGGTGAATGCTTACTTCTTGATTACTGTGAAAGATGGTTATAGTAGTCTAAGGACTTGTGTCTTAACAGAAATGTTTGTTAGCCTTCTTAAAGATGAGCTGAATGAGATAATATACCAGGCTGGTGTTGCTAAGCTGGAGACATCTTTGACAATTATAGGAGACAAGCTTGAGCTAAAGCTATTTGGTTTTAATGATAAGTTATCAACGCTTTTGTCAAAAGTATTGACTATCTCTAGGTCTTTTTCACCCAAAATTGATCGATTCAAGGTCATTAAAGAGGACAAGGAAAGAGCTCTAAAAAATGCCAATATGAAACCATTAAGTCATTCCTCATACTTGCGATTAAAAGTTCTGAGGGAAAAGTTCTGGGATGCTGATGAGAAGCTGGCCTGCCTTGTTAACTTGTCTCTTTCTGATTTAGAGGCATTTATTCCTATTCTTTTATCTGAGTTACATATTGAAGGGCTCTGCCACGGAAATCTTTCGGAGGAAGATGCAATCAATATTTCAGATATATTTAATGATACCTTTTGTGTGCAACCTTTAAGTTTGGGCAAGCATAACCAGGATCGTGTTCTTTGTCTCCCTTCTGGAGAAAGCCTGACCATAAGCATGCCGGTCAAAAATGAGGTTGAAGTAAACTCTGTTGTTGAGCTTTATTTTCAAATTGAACAAGATGATGGTTCGAAAGCAACAAAGTTGAGAGCTGTGACAGATCTCTTCAGCAATATAGTTGAAGAACCTTGTTTTAATCAGTTAAGGACAAAGGAGCAGCTTGGTTATGTTGTTGAATGTGGTCCACGAATGACATACCGTGTTTTAGGTTTCTGTATTCGTGTGCAGTCATCCAAATTTAATCCTTGTTATTTGCATGAGAGGATTGTAAACTTTGTTGGCAGTCTTCATGATTTACTGGTGAAGCTTGATGAGGAATCTTTTGAGAATCATAAAAATGGTTTGATAGCAGAAAAACTAGAGAAAGATCCATCCCTTCTATATGAAACTGGACACTACTGGACACAAATTGTTGACAAAAGGTATCAATTTGACATGCAAAAGCAAGAGGCCGAAGAGCTGAGAGGAACAACGAAAAGGGATGTCATGGAATGGTACAAAGAATACCTAACGAATTCATCACCTAAATGCCGGCGGCTTGCGATCCACATTTGGGGATGCAACTCCGGCCTGTGGGCGGAGGGAAGGAACCAACTCAGATTCGGTAAAGTCATTGATAATATCAGCTCCTTCAAGTTATCTTCTCAATTCTACCCCAGCCTTTGCTGATTTTATTTATTTATTTTTTTCTTTGTTATTATTATTGTTATTCTCTTTTATATTGTATTCTAGAAGAACAGCATTTGAATGCCATTGTTTCTGCACAAATTTTGTGAATTTACTTTTCATGTTAACTTGTGTTTTGTATGCGCTAATTGTTGAGTGATATCTTTATTTGTAATAAAGCTCTTTTCTTCTCAA

Network for GWHGAAEX005781

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00675.19	Peptidase_M16	108	222	1.30E-34
PF05193.20	Peptidase_M16_C	262	441	2.10E-09
PF16187.4	Peptidase_M16_M	449	735	1.60E-80
PF05193.20	Peptidase_M16_C	740	925	8.80E-06

Protein Sequence

>GWHPAAEX005781
MVVHSLNDVVIKSPTDRRSYRILHLPNGLTAVLIHDPDIFSDGTQPGESEADLQTRGLDSDDDDMEDDGNDCEDDKEDCYTEDEEKDEEDDEAGCKCDGRTKKGASLTKKAAAAMCVGMGSFSDPDKAQGLAHFLEHMLFMGSSEFPDENEYDGYLSKHGGSSNAYTETEYTCYHFEVNHEYLKGALERFSQFFISPLIKADAMDREVLAVDSEFNQILQSDSCRLLQLTCHTSTLGHPFNRFFWGNKKSLADAMENGVNLREEILLMYNRNYLGSIMKLVVIGGEPLDILEKWVIELFSQVRNGTPVRAIAECDTPIWQPGKLYRLEAVKDVHALDLSWTLPCLHKEYLKKPEDYLAHLLGHEGSGSLLFSLKAKGWATSLSAGVGDEGMRRSSIAYVFVMSINLTDSGVERIYDIIGFVYQYIKLLRESAPPDWIFKELQDIGNMEFRFVDEQPQDEYAVGLAENLLFYSEEHIIYGEYAFELWDPNLIKYVLTFFSPENMRVDLLSKSFNKESQGCLCEPWFGTSYVEEDIPSSVLELWNDPAIIDPSLHLPLKNEFIPEDFSLCNTNMKHNSKDYYYPKCIIDNPLIKLWHKVDLTFNVPRVNAYFLITVKDGYSSLRTCVLTEMFVSLLKDELNEIIYQAGVAKLETSLTIIGDKLELKLFGFNDKLSTLLSKVLTISRSFSPKIDRFKVIKEDKERALKNANMKPLSHSSYLRLKVLREKFWDADEKLACLVNLSLSDLEAFIPILLSELHIEGLCHGNLSEEDAINISDIFNDTFCVQPLSLGKHNQDRVLCLPSGESLTISMPVKNEVEVNSVVELYFQIEQDDGSKATKLRAVTDLFSNIVEEPCFNQLRTKEQLGYVVECGPRMTYRVLGFCIRVQSSKFNPCYLHERIVNFVGSLHDLLVKLDEESFENHKNGLIAEKLEKDPSLLYETGHYWTQIVDKRYQFDMQKQEAEELRGTTKRDVMEWYKEYLTNSSPKCRRLAIHIWGCNSGLWAEGRNQLRFGKVIDNISSFKLSSQFYPSLC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004222	Molecular Function	metalloendopeptidase activity
GO:0046872	Molecular Function	metal ion binding
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	37.520
SRP064423	SRR2545915	Juvenile tuber	50.500
SRP108465	SRR5643513	five period of Gastrodia elata	36.100
	SRR5643514	five period of Gastrodia elata	36.320
	SRR5643515	five period of Gastrodia elata	30.760
	SRR5643524	five period of Gastrodia elata	33.810
	SRR5643525	five period of Gastrodia elata	22.530
	SRR5643528	five period of Gastrodia elata	23.860
	SRR5643658	five period of Gastrodia elata	28.930
	SRR5643659	five period of Gastrodia elata	35.300
	SRR5643660	five period of Gastrodia elata	32.890
	SRR5643661	five period of Gastrodia elata	29.420
	SRR5643662	five period of Gastrodia elata	28.040
	SRR5643663	five period of Gastrodia elata	33.060
	SRR5643664	five period of Gastrodia elata	28.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	42.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	32.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	40.480
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	42.980
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	45.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.760
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	41.280
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	39.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.120
SRP279888	Gastro	Gastrodia elata tuber	30.73
	Juven	Juvenile tuber	62.91
	Mother_Gastro	Mother tuber of Gastrodia elata	27.15
	Mother_Juven	Mother tuber of Juvenile	39.34