Detail information of GWHGAAEX005786/evm.TU.scaffold_17.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25923.00E-167Tumor differentially expressed (TDE) protein
nrgi|695009881|ref|XP_009391591.1|0PREDICTED: serine incorporator 3 [Musa acuminata subsp. malaccensis]
trEMBLtr|C5WVB3|C5WVB3_SORBI0Putative uncharacterized protein Sb01g016840 {ECO:0000313|EMBL:EER93926.1}
TAIRAT1G161803.00E-167Serinc-domain containing serine and sphingolipid biosynthesis protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001865523596573296-
Transcript Sequence

Network for GWHGAAEX005786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03348.14Serinc94104.10E-109
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms87.320
SRR2545915Juvenile tuber80.260
SRP108465SRR5643513five period of Gastrodia elata84.180
SRR5643514five period of Gastrodia elata66.960
SRR5643515five period of Gastrodia elata65.340
SRR5643524five period of Gastrodia elata69.950
SRR5643525five period of Gastrodia elata158.330
SRR5643528five period of Gastrodia elata121.180
SRR5643658five period of Gastrodia elata194.820
SRR5643659five period of Gastrodia elata57.100
SRR5643660five period of Gastrodia elata60.780
SRR5643661five period of Gastrodia elata56.420
SRR5643662five period of Gastrodia elata58.660
SRR5643663five period of Gastrodia elata75.120
SRR5643664five period of Gastrodia elata68.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1108.170
SRR6049655Rhizomagastrodiae_C368-T10_good_1136.020
SRR6049656Rhizomagastrodiae_C368-T07_good_179.850
SRR6049657Rhizomagastrodiae_C368-T07_good_1130.860
SRR6049658Rhizomagastrodiae_C368-T04_good_1114.830
SRR6049659Rhizomagastrodiae_C368-T04_good_1156.340
SRR6049660Rhizomagastrodiae_C368-T01_good_1102.000
SRR6049661Rhizomagastrodiae_C368-T04_good_197.950
SRR6049662Rhizomagastrodiae_C368-T01_good_167.930
SRR6049663Rhizomagastrodiae_C368-T01_good_175.110
SRR6049664Rhizomagastrodiae_C368-T10_good_179.410
SRR6049665Rhizomagastrodiae_C368-T10_good_179.410
SRP279888GastroGastrodia elata tuber 66.33
JuvenJuvenile tuber104.17
Mother_GastroMother tuber of Gastrodia elata 78.03
Mother_JuvenMother tuber of Juvenile 137.72