Detail information of GWHGAAEX005790/evm.TU.scaffold_17.181


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743883017|ref|XP_010909305.1|3.30E-149PREDICTED: uncharacterized protein LOC105035446 [Elaeis guineensis]
Swissprottr|P14233|TGA1B_TOBAC2.00E-20TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment)
trEMBLtr|M0RV99|M0RV99_MUSAM7.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P25190_001}
TAIRAT3G566608.00E-74basic region/leucine zipper motif protein 49

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001868569996878752+
Transcript Sequence

Network for GWHGAAEX005790

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_11652261.30E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.450
SRR2545915Juvenile tuber14.620
SRP108465SRR5643513five period of Gastrodia elata12.850
SRR5643514five period of Gastrodia elata13.490
SRR5643515five period of Gastrodia elata14.730
SRR5643524five period of Gastrodia elata13.520
SRR5643525five period of Gastrodia elata22.160
SRR5643528five period of Gastrodia elata31.230
SRR5643658five period of Gastrodia elata28.420
SRR5643659five period of Gastrodia elata11.040
SRR5643660five period of Gastrodia elata13.080
SRR5643661five period of Gastrodia elata11.730
SRR5643662five period of Gastrodia elata9.720
SRR5643663five period of Gastrodia elata11.890
SRR5643664five period of Gastrodia elata11.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.460
SRR6049655Rhizomagastrodiae_C368-T10_good_113.550
SRR6049656Rhizomagastrodiae_C368-T07_good_112.130
SRR6049657Rhizomagastrodiae_C368-T07_good_19.700
SRR6049658Rhizomagastrodiae_C368-T04_good_112.650
SRR6049659Rhizomagastrodiae_C368-T04_good_111.650
SRR6049660Rhizomagastrodiae_C368-T01_good_111.210
SRR6049661Rhizomagastrodiae_C368-T04_good_112.830
SRR6049662Rhizomagastrodiae_C368-T01_good_114.660
SRR6049663Rhizomagastrodiae_C368-T01_good_115.290
SRR6049664Rhizomagastrodiae_C368-T10_good_116.510
SRR6049665Rhizomagastrodiae_C368-T10_good_116.510
SRP279888GastroGastrodia elata tuber 10.72
JuvenJuvenile tuber11.88
Mother_GastroMother tuber of Gastrodia elata 25.95
Mother_JuvenMother tuber of Juvenile 28.68