Detail information of GWHGAAEX005792/evm.TU.scaffold_17.183
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1187 | 5.00E-94 | Serine/threonine protein kinase |
| nr | gi|743788739|ref|XP_010922742.1| | 1.60E-112 | PREDICTED: probable receptor-like protein kinase At3g55450 [Elaeis guineensis] |
| Swissprot | tr|Q9LFP7|Y5158_ARATH | 4.00E-44 | Probable receptor-like protein kinase At5g15080 |
| trEMBL | tr|A0A061EHG2|A0A061EHG2_THECC | 6.00E-112 | Kinase superfamily protein isoform 1 {ECO:0000313|EMBL:EOY04460.1} |
| TAIR | AT3G08760 | 5.00E-94 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000018 | 6881548 | 6886394 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005792
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 78 | 190 | 6.40E-08 |
| PF07714.16 | Pkinase_Tyr | 198 | 294 | 2.70E-05 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-II |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004713 | Molecular Function | protein tyrosine kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.680 |
| SRR2545915 | Juvenile tuber | 10.350 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.550 |
| SRR5643514 | five period of Gastrodia elata | 19.830 | |
| SRR5643515 | five period of Gastrodia elata | 15.320 | |
| SRR5643524 | five period of Gastrodia elata | 16.850 | |
| SRR5643525 | five period of Gastrodia elata | 11.800 | |
| SRR5643528 | five period of Gastrodia elata | 11.250 | |
| SRR5643658 | five period of Gastrodia elata | 15.410 | |
| SRR5643659 | five period of Gastrodia elata | 9.830 | |
| SRR5643660 | five period of Gastrodia elata | 10.210 | |
| SRR5643661 | five period of Gastrodia elata | 11.220 | |
| SRR5643662 | five period of Gastrodia elata | 10.680 | |
| SRR5643663 | five period of Gastrodia elata | 8.840 | |
| SRR5643664 | five period of Gastrodia elata | 14.430 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 33.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 42.240 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.780 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.950 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.500 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.960 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 53.670 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 48.420 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 48.420 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.37 |
| Juven | Juvenile tuber | 7.67 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 21.90 | |
| Mother_Juven | Mother tuber of Juvenile | 11.52 |