Detail information of GWHGAAEX005809/evm.TU.scaffold_17.208
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 3.00E-28 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|672140365|ref|XP_008793984.1| | 0 | PREDICTED: probable receptor-like protein kinase At1g49730 [Phoenix dactylifera] |
| Swissprot | tr|Q9FX99|Y1497_ARATH | 0 | Probable receptor-like protein kinase At1g49730 (Precursor) |
| trEMBL | tr|Q7XST7|Q7XST7_ORYSJ | 0 | Os04g0689400 protein {ECO:0000313|EMBL:BAF16259.1} |
| TAIR | AT1G49730 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000018 | 8101668 | 8146229 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005809
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 330 | 592 | 2.10E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_URK-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.270 |
| SRR2545915 | Juvenile tuber | 13.410 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.890 |
| SRR5643514 | five period of Gastrodia elata | 5.760 | |
| SRR5643515 | five period of Gastrodia elata | 5.060 | |
| SRR5643524 | five period of Gastrodia elata | 6.190 | |
| SRR5643525 | five period of Gastrodia elata | 3.530 | |
| SRR5643528 | five period of Gastrodia elata | 2.310 | |
| SRR5643658 | five period of Gastrodia elata | 4.090 | |
| SRR5643659 | five period of Gastrodia elata | 9.080 | |
| SRR5643660 | five period of Gastrodia elata | 7.790 | |
| SRR5643661 | five period of Gastrodia elata | 9.630 | |
| SRR5643662 | five period of Gastrodia elata | 6.880 | |
| SRR5643663 | five period of Gastrodia elata | 9.570 | |
| SRR5643664 | five period of Gastrodia elata | 8.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.240 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.800 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.920 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.350 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 9.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.890 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.890 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.73 |
| Juven | Juvenile tuber | 7.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.00 | |
| Mother_Juven | Mother tuber of Juvenile | 4.14 |