Gene detail

Detail information of GWHGAAEX005816/evm.TU.scaffold_170.11

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|158318503\|ref\|YP_001511011.1\|	3.00E-26	WD-40 repeat-containing serine/threonin protein kinase [Frankia sp. EAN1pec]
KOG	KOG0606	0	Microtubule-associated serine/threonine kinase and related proteins
nr	gi\|743771780\|ref\|XP_010916180.1\|	0	PREDICTED: probable serine/threonine protein kinase IREH1 [Elaeis guineensis]
Swissprot	tr\|F4J6F6\|IREH1_ARATH	0	Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBL	tr\|M0TGB7\|M0TGB7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P10290_001}
TAIR	AT3G17850	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000169	1050871	1097572	-

Transcript Sequence
>GWHTAAEX005816 CGTTTAGTCAATCCGCCACATTTTAGAATTATGCCGCCCTCTTTAGAGTTCGTCCCGCATTTTGATTTAAGAAGGACGAGATATAAATAAGATGATGCTGTAAGCCTAGATCTACTTTAAGATGGCGGTATGAGCAATGTACAGGCAGCACAAATCTTGAATCAAATCTAATGACGGCCAACAGCTTTTCTGTGTTTCTTGCAGTGGATGAGATGTCTTTCCAGTTTTTCTGTCCGCCGTGACCGTCGCCTCTCCCACCCTTACTCACTATTGACCGGAAAGGACTTCAGTAGAGCCCCCTTCGAAGCGAAGAACTTGTAACTGAAGCGTTAAAATCAGAAGGGAATCAGAGAGCAGAGTCGCTTGAGAAGGAGAAAGGCGAGATGGTTTTCAAAGGGCGATTCTTCTCCTCGAAGAAACCCTCGGACTCCTCCAGTCCCGATAGAGGCTCGAGCAGCCCCGGAACTCCCACTTCTGATTCCCCTTCCAAATCTGAAAAGAAGAAGTCCCGATCATCCTCCGAAGATGCGAGGAAGATCCAGCAGCAGCAGCCGAAGAAGAAGGATAATGAGAAAGGGAAGGAAAAGGTGAAGGAGAACGACAAGGATAAGAAGGGGAAAGAAGCCGCCAAGCCCTCGCCTCCCGGTGCAGCTGTTTCCGCCCCCGCTAAGATCTGGAAGGGTGTTGGGATCAAGGATGGAGGGGCGGCTTCTGGGTCCTTGCTTTCTCCGACCATGGCTTCTTCCCACGGCTTAAACCGCATCAAGACGAGATCCGGGCCATTGCCACAGGAGGCCTTCCGGGAGAACAGGATCTCTGGAATTGGGAGTAGCAACCTTAGTAGGGGAGGAAATTGTTCCACCTCTTCCACGTCAGCATCTTCAATGCCATCTTCTTTGTCTCTTTTAGGAGTCGGAAGTAGCAGTTTCAAGAAGAAGGATACACGCCCGCTGGAGAAGGTCCCGGAGTCTAGTGTCAGTTCATGGGCTGATCACGAGAGGAGACAGTTTGATGACACATTTAAGTCTGTATCAGCATTGAGTACCATGGGAAAGATTGATCAGTCACGTCAAGGCTTCAGCTCTGCTGCTCGTGCTTCAGAAGCACAGTTGCCATACGATACTTGTGAAACTCCTAAAGAGTCTGAATCTCCTCGCTTTCAAGCCATAATGCAGGCTACCAATGCACCTAGGAAGAGACTTCCTGCAGACATTAAAAGCTTTTCTCATGAGTTAAACTCCAAGGGTGTACGCCCTTTTCCATTTTGGAAGCCTCGCTATATGTATAACCTTAAGGAGGTTTTGAAAGATATTCAGGTGAAATTTGAGAAGGCAAAAGAAGAGGTAAACTCTGACTTAGCTGTTTTTGGAGGTGATTTGGTTGGCTTATTGGAAAAAAGTGCAGAGAGTCATCCAGACTGGAGGGAAACTTTAGAGGACTTACTTGTGCTTGCCAGGACCTGTTGTGTCACAACTCCTGGGGAGTTTTGGCTCCAATGTGAAGGCATAGTTCAGGATTTGGATGATCGTCGCCAGGCACTACCCATGGGGGTACTTAAGAAACTGCACACTCGGATGCTTTTTATTCTCACAAGATGTACTAGATTGCTTCAGTTCCACAAGGAGAGTGGATTTGCGGAGGATGAGCTTGTTATGGATCTTCGTAGGCTCCATTCAGCTGATAAAAGTGCTGTGGCTGGAAAAGATGGGAAAAGTGCTAATGCTATAAGGAGTACCAATGAGGTTGCTGCTTCAAAGAAGTCTTTTAGTCAGGATCAATATAATTTGAAATTGAAAAGCCAGGAGATAAAACCTTCAGATTTCTTCTCACAATTTGAGCCAAATTTCACGAAGGAAGAAGATGCAGTGTCAAGCAGAGAACGCATTGCTTCCTGGAAGCCTCTCCGATCACCTTCATCTAAACATCAAAAGGAAGTGAGCTCTACCAAGTATGAAACATCTGTTATGGCTTTGCATATGCCAAATAGAGAAGACAATGCAGATGCAAACATGGATAGTGTTAAGCTTGCTGAGGTAAGCAGTACTGGAGAGGCCAACTTGCACCCTTCAGTTCCATCCAAACATCAGCACAAAGTTTCCTGGGGTTACTGGAGCGATCAACAAACTGTTTCTGAAGAGGGTTCAATAATGTGTCGCATTTGTGAGGAGTATGTTCCAACATTGTATGTTGAGGATCATTCAAAAATCTGTGCAGTTGCTGACAGATGTGATAAAAAAGGTTTAAGTGTTGATGAACGTCTTCTCAGAATTGCAGAGACCTTAGAAAAGTTGATAGAATCTTATTCTCAGAAGGAACTTCTTAATATGGCTGGAAGCCCTGATCCAGATGTTACTAAAATATCTAATTCAAGTGTTACCGAAGAATCGGATGCCATTTCACCAAAACTTGGTGATTGGTCACGGAGAGATTCTGCTGATATGCTTGATTGTTTTCAAGAGACAGATAGTTCTATATTTCTGGATGATTTGAAGAGCCTTCCATCAATGACATGCAAGACTCGTTTTGCTCCGAAGTCTGATCAAGCAATGGCTTCCTCATCTACTGGCAGTTTAACTCCTAGATCACCACTAGTGACACCAAAAACCAACCATATAGACATGCTTTTGGCTGTTCGGAATGCGATATCTGAAAGCGAGGATCTTCCACAGATAACTGAGCTTGCTGACATTGCTCGATGTGTTGCAAATACTCCAGTTGATGAGGAAAGTTCCCTGTCATATTTGGTTTCATGTATGGAAGATTTGCAAGAAGTTATTAGTCATCGGAAACTTGAGGCGCTTACTGTACAAACATTTGGAACGCGCATTGAAAAACTTCACCAGGAAAAATACCTTCATCTATGTGATGCTGTTGATTTTGAAAAGGCTGATGCAACAAGTGCAATAATGGATGAAGAAGATGATGTTGTGCGAAGTTTGCGTGCAAGCCCTGTTCACCCTAATAGTAAAGAACGCACATCCATTGATGACTTTGAGATCATAAAGCCTATTAGCCGCGGTGCGTTTGGCCGGGTTTTCTTAGCCAAAAAAAGAACAACGGGTGATCTCTTTGCTATAAAGGTTCTAAGAAAAGCTGATATGATTCGGAAAAATGCTGTAGAGAGCATATTGGCAGAACGTGATATCTTAATCTCTGTTCAAAATCCTTTTGTGGTGAGGTTCTTTTATTCTTTTACATCGCGGGAGAATTTGTATCTTGTGATGGAGTACTTGAATGGAGGCGACCTGTATTCGTTGATTAGAAATTTAGGCTGCTTGGATGAGGATGTTACTCGGATATATATTGCAGAAGTTGTTCTTGCTTTGGAATATTTACACTCTCTACGAGTGGTACATCGAGATCTGAAGCCAGATAATTTGCTGATTGCCCATGATGGTCATATCAAGTTGACAGATTTCGGACTATCCAAGGTTGGTCTTATCAATAGTACAGATGATTTATCAGGACCTGCTGTTAGTGGAACTTCTCTGCTTGGAGAAGATGAGCCCCAAGTATCTCCTTTTGAGAACTTAGATCAGCGGGAAAGACGGAAAAAACGCTCTGCTGTCGGCACACCTGATTATCTGGCACCAGAAATACTCTTGGGCACTGGACATGGTGCAACGGCTGATTGGTGGTCTGTTGGTGTTATCCTCTTTGAGTTACTTGTTGGAATTCCACCATTCAATGCAGAACATCCTCAGATGATTTTTGACAACATTTTAAATCGTAAAATACCATGGCCCCAAGTTCCTGAAGAAATGAGTGTTGAAGCAGCAGATCTTATTAACAAATTACTAACTGAAGATCCTCATCAAAGGCTTGGAGCAAAAGGTGCTTCGGAAGTCAAGCAGCATGGCTTTTTTAAAGACATCAACTGGGATACACTTGCCAGACAGAAGGCTGCGTTTGTTCCCTCTTCGGATAATGCGACCGACACAAGTTATTTCACGTGCCGCTACTCATGGAATATGTCGGACGAACGCGGTTACGAGGCTAACGAATTTGAGGATTCTTCCGACAACGGCAGCATAAGCGGCGCCAGCAGCTGTACGAGCAATCACCAAGATGAACTGGGGGATAAGTACGGTAGAGTCGAGGAGTATGGCAATGAAGCGTCTGCGAATTATTCGTTCAGTAATTTCTCTTTCAAGAATCTCTCGCAGCTTGCGTCCATCAATTACGACTTGCTTGGGATGGGATGGAAGGATGCTGAATCGAGGCCTGCTGATTCATAACACTTTTGCCCAACAAACCACTTTCAGGTTCCCATTTTTATTATACAGGAGGAACACTGAGGGAGTATTGCCATGATGTACAGTACAGGTTGCCCTTCTCTGATTTATATGTTAAAGTTTTTTCTTTTTTCTGATTTACATTATTATTATTATTATGACTATTATACGAAGAAGATAGGAACTGAATCTGCAAGTTTTGGAAGCCAGACGTTGATTATATTTTACAGAAATCATTGGCACAGGTTTTGTTTCGGCCTTTAAATCCATTCCACAGGTGGTGGGTTTTTCCTGCCTCTATCTATATAGATATCTTGATATTTTTCTTGTTGTGTGATAATGGGCCTTGTGGATGAATATAGCAGTATGTTCACTTGAATTAAATGAAATTAATATCAAATGATGCCCTTTTTGTTTGATCGGCCCTCTCTCGGCTCTCCCTTCTACACTGCAGCAGCAGTTGTCTGTTAAATGATTTGCTGTGAAATTCTGC

Network for GWHGAAEX005816

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	871	1161	9.30E-65

Protein Sequence

>GWHPAAEX005816
MVFKGRFFSSKKPSDSSSPDRGSSSPGTPTSDSPSKSEKKKSRSSSEDARKIQQQQPKKKDNEKGKEKVKENDKDKKGKEAAKPSPPGAAVSAPAKIWKGVGIKDGGAASGSLLSPTMASSHGLNRIKTRSGPLPQEAFRENRISGIGSSNLSRGGNCSTSSTSASSMPSSLSLLGVGSSSFKKKDTRPLEKVPESSVSSWADHERRQFDDTFKSVSALSTMGKIDQSRQGFSSAARASEAQLPYDTCETPKESESPRFQAIMQATNAPRKRLPADIKSFSHELNSKGVRPFPFWKPRYMYNLKEVLKDIQVKFEKAKEEVNSDLAVFGGDLVGLLEKSAESHPDWRETLEDLLVLARTCCVTTPGEFWLQCEGIVQDLDDRRQALPMGVLKKLHTRMLFILTRCTRLLQFHKESGFAEDELVMDLRRLHSADKSAVAGKDGKSANAIRSTNEVAASKKSFSQDQYNLKLKSQEIKPSDFFSQFEPNFTKEEDAVSSRERIASWKPLRSPSSKHQKEVSSTKYETSVMALHMPNREDNADANMDSVKLAEVSSTGEANLHPSVPSKHQHKVSWGYWSDQQTVSEEGSIMCRICEEYVPTLYVEDHSKICAVADRCDKKGLSVDERLLRIAETLEKLIESYSQKELLNMAGSPDPDVTKISNSSVTEESDAISPKLGDWSRRDSADMLDCFQETDSSIFLDDLKSLPSMTCKTRFAPKSDQAMASSSTGSLTPRSPLVTPKTNHIDMLLAVRNAISESEDLPQITELADIARCVANTPVDEESSLSYLVSCMEDLQEVISHRKLEALTVQTFGTRIEKLHQEKYLHLCDAVDFEKADATSAIMDEEDDVVRSLRASPVHPNSKERTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLRKADMIRKNAVESILAERDILISVQNPFVVRFFYSFTSRENLYLVMEYLNGGDLYSLIRNLGCLDEDVTRIYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQVSPFENLDQRERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGVILFELLVGIPPFNAEHPQMIFDNILNRKIPWPQVPEEMSVEAADLINKLLTEDPHQRLGAKGASEVKQHGFFKDINWDTLARQKAAFVPSSDNATDTSYFTCRYSWNMSDERGYEANEFEDSSDNGSISGASSCTSNHQDELGDKYGRVEEYGNEASANYSFSNFSFKNLSQLASINYDLLGMGWKDAESRPADS

Gene family

Gene family	subfamily
Protein Kinases Family	AGC_MAST

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding
GO:0004674	Molecular Function	protein serine/threonine kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.060
SRP064423	SRR2545915	Juvenile tuber	25.040
SRP108465	SRR5643513	five period of Gastrodia elata	16.750
	SRR5643514	five period of Gastrodia elata	16.770
	SRR5643515	five period of Gastrodia elata	23.790
	SRR5643524	five period of Gastrodia elata	18.390
	SRR5643525	five period of Gastrodia elata	17.120
	SRR5643528	five period of Gastrodia elata	19.660
	SRR5643658	five period of Gastrodia elata	14.370
	SRR5643659	five period of Gastrodia elata	23.980
	SRR5643660	five period of Gastrodia elata	23.420
	SRR5643661	five period of Gastrodia elata	20.960
	SRR5643662	five period of Gastrodia elata	24.980
	SRR5643663	five period of Gastrodia elata	22.150
	SRR5643664	five period of Gastrodia elata	23.660
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.940
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	17.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.250
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.030
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.480
SRP279888	Gastro	Gastrodia elata tuber	17.69
	Juven	Juvenile tuber	22.08
	Mother_Gastro	Mother tuber of Gastrodia elata	31.45
	Mother_Juven	Mother tuber of Juvenile	62.31