Detail information of GWHGAAEX005821/evm.TU.scaffold_170.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|5.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11870Serine/threonine protein kinase
nrgi|720003241|ref|XP_010256925.1|0PREDICTED: protein kinase APK1A, chloroplastic [Nelumbo nucifera]
Swissprottr|Q06548|APK1A_ARATH0Protein kinase APK1A, chloroplastic (Precursor)
trEMBLtr|V4SC26|V4SC26_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR38077.1}
TAIRAT1G075700Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016916379551655665-
Transcript Sequence

Network for GWHGAAEX005821

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr883669.50E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms87.160
SRR2545915Juvenile tuber92.130
SRP108465SRR5643513five period of Gastrodia elata77.280
SRR5643514five period of Gastrodia elata62.120
SRR5643515five period of Gastrodia elata70.390
SRR5643524five period of Gastrodia elata66.010
SRR5643525five period of Gastrodia elata93.980
SRR5643528five period of Gastrodia elata75.800
SRR5643658five period of Gastrodia elata82.760
SRR5643659five period of Gastrodia elata84.530
SRR5643660five period of Gastrodia elata101.410
SRR5643661five period of Gastrodia elata99.640
SRR5643662five period of Gastrodia elata102.940
SRR5643663five period of Gastrodia elata87.310
SRR5643664five period of Gastrodia elata102.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_182.850
SRR6049655Rhizomagastrodiae_C368-T10_good_178.150
SRR6049656Rhizomagastrodiae_C368-T07_good_171.440
SRR6049657Rhizomagastrodiae_C368-T07_good_192.230
SRR6049658Rhizomagastrodiae_C368-T04_good_193.490
SRR6049659Rhizomagastrodiae_C368-T04_good_1117.560
SRR6049660Rhizomagastrodiae_C368-T01_good_189.390
SRR6049661Rhizomagastrodiae_C368-T04_good_188.300
SRR6049662Rhizomagastrodiae_C368-T01_good_170.400
SRR6049663Rhizomagastrodiae_C368-T01_good_179.260
SRR6049664Rhizomagastrodiae_C368-T10_good_167.360
SRR6049665Rhizomagastrodiae_C368-T10_good_167.360
SRP279888GastroGastrodia elata tuber 118.94
JuvenJuvenile tuber99.50
Mother_GastroMother tuber of Gastrodia elata 92.85
Mother_JuvenMother tuber of Juvenile 83.87