Gene detail

Detail information of GWHGAAEX005828/evm.TU.scaffold_170.30

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0243	Kinesin-like protein
nr	gi\|672172030\|ref\|XP_008806097.1\|	PREDICTED: 125 kDa kinesin-related protein [Phoenix dactylifera]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|I1I9G9\|I1I9G9_BRADI	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT2G36200	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000169	1921764	1930817	+

Transcript Sequence
>GWHTAAEX005828 GAGGAAAGCAAGAGTTCGATCGACGCCTCCTCGATCCTTTTCTCCGGCCACCTCTTTCTTCCATTAGGGCGCCTTATACAATCTTAAACTAGAATGTTGGCTTCATCGCGCTCTGAGAAGGAGAAGTCTGTGAACGTCCAGGTTCTTCTCCGCTGCAGGCCTTTCAGTGAGGACGAGCTTCGGAATAATGCACCGCAAGTGGTAACCTGCAACGAATTCCAGAAGGAGGTATCTGTGTCTCAGACAATCGCCGGAAAGCAGTTTGACAGGGTGTTCACGTTCGATAAGGTCTTTGGTCCGTCTGCCAAACAAAAGGACTTATACGAACAAGCAATAATTCCAATTGTAAATGAGGTCTTGGAGGGCTTTAACTGTACAATTTTTGCCTACGGACAAACTGGTACTGGGAAAACTTATACTATGGAAGGTGAATGCAGAAGAACTAAGAAGGCTTCAAAGGATCAACTACCATTAGATGCTGGTGTTATACCTAGAGCTGTCAAACAAATCTTTGATGCATTAGAGTCTCAACACACTGACTATAGTGTGAAGGTCACTTTTCTAGAGCTGTATAATGAAGAAATTACTGATTTGTTGGCTCCAGAAGAGTTATCTAAAATTTCATTGGAGGAAAAGCAGAAAAAGCAATTGCCACTAATGGAGGATGGCAAAGGAGGAGTTTTGGTGCGAGGCTTAGAGGAAGAAATAGTAACAAGTGCTAATGAAATATTCTCACTTTTAGAGAGAGGGTCTTCAAAACGTCGAACTGCCGAGACACTGCTAAACAAACAATCTAGCCGTTCACATTCTCTCTTTTCAATCACCATTCACATTAAAGAGGCAACACCAGAAGGTGAAGAGCTAATTAAAAGTGGGAAGCTAAATCTTGTGGATCTTGCTGGGTCTGAAAATATTTCTCGATCAGGTGCTAGAGAGGGTCGTGCTAGAGAAGCTGGGGAAATAAATAAAAGTTTACTAACCTTAGGTCGTGTTATTACAGCACTTGTAGAGCATCTTGGTCATATTCCTTATAGAGATAGTAAGTTGACACGTTTACTTCGTGATTCCTTGGGTGGGAGGACCAAGACATGTATAATTGCTACAGTTTCACCTTCTGTACATTGTCTTGAAGAGACACTTAGTACCTTAGATTATGCTCATAGAGCAAAGAATATAAAAAATAGGCCTGAGGTAAACCAAAAAATGATGAAGTCAACATTAATCAAGGATTTATATGGTGAAATAGATCGCTTAAAAGCAGAGGTTTATGCTACTCGTGAGAAAGTTGGAGTATACATACCCAAAGAGAGATACTACCAAGAGGAGGCTGAAAGGAAGGCAATGACAGAACAAATTGAGCAAATGGGTGTGCTGCTCGAAGCCAATCAAAAGCAAATACAAGAACTTCAAGAAAAATATAATCTTCAACTGCAACAAACTACAGTTGTGAGCAAAAAACTTATTGCTACAGAGAGAAGCTTGGATCATACCAACAAACAGTTTGCCACTGCAAAGGAAGATCTGCAGTATTCCCATTATCAATTGAAAGAAAAGGATTTTATTATTGCAGAGCAACGGAAGGCTGAGAATGCTTTGGCGCATCAAGCCTTTGCTCTGAAACAGGACAATGCTTCACTGTTTTCTAAAATAGCCAGAGAAGATCAACTGAGCGTTGCAAATAAGTCATTGGTCGACAAGTTTCGAGCTGATCTCTCCGAGAGGATTGATGCCGTTTGCGACCTTCTTGCCTCATCCATTAAACGCCAGAATATGCATCTTCAGACGGTCGAGCAGCTCAGCAAGTCATGTCTGGAGTTTCATGATAAGGCCCTAATTGATTTGAAAGAGAAGGTATCAGCTTCGAGATTAACGTACGCTGCTCACATTGAAGGAATGCAGAATGCCATCACTTTGCACAAGGCGACAAACAATTCTAGCCTGGAAGAGTTATCATCTGCTGCTACCGCAAATAGTTTCTCTCTCGATCACTTACTTGCTCTAGGAGGAGCAGATGCAAGCCTGATTTTCACTGAAGTACAGCACAGTCTATCCAACCTCAGAGGAGAAATTGCGCAGTTTACGGGGGAGCTTCGCAAGAGATTCGGCGCTAGTTTGGATCATTCCAAGGAGATTTCTGGCTTCGTTTTTCTACTGGTGGAGGAATTAAGAGAGAAGTCCAGCCTACTTCAGAGCCATTCGAATTCGGCTCACGAAGCGATGACCCGAAGCATCTCCGAATTTCAAAGAGCATATGAAGAGCAGACGAGATCTGACACCGAGAAGCTAGTAGCATTTATTTCCTCGCACATGCGCAGACAAAAAGAGATGGTAGATGCGAGGCTCGACGGGCTTAAAGATGCGGCTTTGGAGAGCAAAGTGTTCCTGGACAGGCACGCGTCATCGGCGGCGAGCACGTCCGGGGGGGCCAAGAGGAGGTGGGAGGAGTTTTATTTGCAGATGCGGCATGATTCGTCAGACGGTTCAGATTTCTCCAGTGCGAAGCACTGCCGATTGGAAGCCATTCTTCAGCAATGCGTTGATAGTGCGGATGCTACATGCCAGCAGTGGGAGAAGGTGCGCGCGTCTGCCAGTGAGATGTGCGCCCATCAGGCTAAAGAAATGGACGCCATCATCAGTGATGCCATGGAGAGCAACGAGCGGCACGGAGCGGAGGCACATGCAATGCGGGTGGCGGCAGAGGAGGACGCTGCGAAGAACGGCACGGAGCTCATCCGGCAATTGGACGAGGTGATGGACAGGGAGAGGAGATCAGTGGGCGAAGCGATGGCGGCGACGGAGTCCCATCGGGAGTGCTTGCAGGAGCTCGGCGAGGATCACAGCAGCCGTGCCTCTGGCATAAACTCCTGCGCGGCGGCAGCTCTCCAGCACGACTACATGGTGTACGAGGCAAGCGGGGAGACACCACTGAAGGTGGAGGAGGCGGATGTGCCTGGCGGAGGGACGATAGAGTCACTGCGGGTGATGCCCGTCGATGCCCTGCTTGAGGAGTTCAGGGAGAACAACCCTTATGAACCCGCAGCTGCCGGTAAGCCTTCCCTCATTCCCCGTTCCCCCCTTAATCAGCTCAATTAACCTCTCCTGTTCGGTTTGTTCTCTTGTCTCTCTCTCTATGTATATATAGTTTATTCATTTTTTTGGTTCTCTTTATCTCTAAAAAATATGATGGTATTTCTATCTGCAATGCGTTTGTGTATGTCTCAGCTCCTTCACTGTAAAACCATTGGTTGAACGATAAGGATGTTATTTGTAAGTTGTTAGTGTCATCATTGATGGCTGCTGTAATTAATTGGTTTTGGAAGCTTGGAGGCTTGGATGATATCTGCAGTATGGTAATTATTTTTTTTATATTAGAACAAG

Network for GWHGAAEX005828

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	20	361	4.60E-118

Protein Sequence

>GWHPAAEX005828
MLASSRSEKEKSVNVQVLLRCRPFSEDELRNNAPQVVTCNEFQKEVSVSQTIAGKQFDRVFTFDKVFGPSAKQKDLYEQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECRRTKKASKDQLPLDAGVIPRAVKQIFDALESQHTDYSVKVTFLELYNEEITDLLAPEELSKISLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTSANEIFSLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKSGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPSVHCLEETLSTLDYAHRAKNIKNRPEVNQKMMKSTLIKDLYGEIDRLKAEVYATREKVGVYIPKERYYQEEAERKAMTEQIEQMGVLLEANQKQIQELQEKYNLQLQQTTVVSKKLIATERSLDHTNKQFATAKEDLQYSHYQLKEKDFIIAEQRKAENALAHQAFALKQDNASLFSKIAREDQLSVANKSLVDKFRADLSERIDAVCDLLASSIKRQNMHLQTVEQLSKSCLEFHDKALIDLKEKVSASRLTYAAHIEGMQNAITLHKATNNSSLEELSSAATANSFSLDHLLALGGADASLIFTEVQHSLSNLRGEIAQFTGELRKRFGASLDHSKEISGFVFLLVEELREKSSLLQSHSNSAHEAMTRSISEFQRAYEEQTRSDTEKLVAFISSHMRRQKEMVDARLDGLKDAALESKVFLDRHASSAASTSGGAKRRWEEFYLQMRHDSSDGSDFSSAKHCRLEAILQQCVDSADATCQQWEKVRASASEMCAHQAKEMDAIISDAMESNERHGAEAHAMRVAAEEDAAKNGTELIRQLDEVMDRERRSVGEAMAATESHRECLQELGEDHSSRASGINSCAAAALQHDYMVYEASGETPLKVEEADVPGGGTIESLRVMPVDALLEEFRENNPYEPAAAGKPSLIPRSPLNQLN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.200
SRP064423	SRR2545915	Juvenile tuber	1.400
SRP108465	SRR5643513	five period of Gastrodia elata	4.020
	SRR5643514	five period of Gastrodia elata	5.240
	SRR5643515	five period of Gastrodia elata	5.150
	SRR5643524	five period of Gastrodia elata	4.910
	SRR5643525	five period of Gastrodia elata	3.940
	SRR5643528	five period of Gastrodia elata	3.710
	SRR5643658	five period of Gastrodia elata	4.590
	SRR5643659	five period of Gastrodia elata	2.710
	SRR5643660	five period of Gastrodia elata	2.250
	SRR5643661	five period of Gastrodia elata	2.300
	SRR5643662	five period of Gastrodia elata	4.720
	SRR5643663	five period of Gastrodia elata	5.280
	SRR5643664	five period of Gastrodia elata	5.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.560
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.110
SRP279888	Gastro	Gastrodia elata tuber	6.42
	Juven	Juvenile tuber	1.64
	Mother_Gastro	Mother tuber of Gastrodia elata	2.91
	Mother_Juven	Mother tuber of Juvenile	2.10