Detail information of GWHGAAEX005846/evm.TU.scaffold_171.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16525.00E-94Mitochondrial import inner membrane translocase, subunit TIM17
nrgi|720035749|ref|XP_010267135.1|7.80E-115PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Nelumbo nucifera]
Swissprottr|Q9SP35|TI172_ARATH1.00E-94Mitochondrial import inner membrane translocase subunit TIM17-2
trEMBLtr|F2D7I4|F2D7I4_HORVD1.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_13809.1, ECO:0000313|EnsemblPlants:MLOC_13809.2}
TAIRAT2G374105.00E-94translocase inner membrane subunit 17-2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016521224142126955+
Transcript Sequence

Network for GWHGAAEX005846

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02466.18Tim17161222.70E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.030
SRR2545915Juvenile tuber66.290
SRP108465SRR5643513five period of Gastrodia elata69.570
SRR5643514five period of Gastrodia elata68.610
SRR5643515five period of Gastrodia elata64.900
SRR5643524five period of Gastrodia elata62.640
SRR5643525five period of Gastrodia elata106.890
SRR5643528five period of Gastrodia elata84.690
SRR5643658five period of Gastrodia elata87.040
SRR5643659five period of Gastrodia elata130.220
SRR5643660five period of Gastrodia elata151.740
SRR5643661five period of Gastrodia elata145.470
SRR5643662five period of Gastrodia elata162.920
SRR5643663five period of Gastrodia elata131.510
SRR5643664five period of Gastrodia elata192.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1120.280
SRR6049655Rhizomagastrodiae_C368-T10_good_1109.990
SRR6049656Rhizomagastrodiae_C368-T07_good_1130.250
SRR6049657Rhizomagastrodiae_C368-T07_good_1109.340
SRR6049658Rhizomagastrodiae_C368-T04_good_1143.090
SRR6049659Rhizomagastrodiae_C368-T04_good_1128.860
SRR6049660Rhizomagastrodiae_C368-T01_good_1133.440
SRR6049661Rhizomagastrodiae_C368-T04_good_1124.930
SRR6049662Rhizomagastrodiae_C368-T01_good_1131.200
SRR6049663Rhizomagastrodiae_C368-T01_good_1142.070
SRR6049664Rhizomagastrodiae_C368-T10_good_1128.660
SRR6049665Rhizomagastrodiae_C368-T10_good_1128.660
SRP279888GastroGastrodia elata tuber 261.50
JuvenJuvenile tuber110.55
Mother_GastroMother tuber of Gastrodia elata 88.47
Mother_JuvenMother tuber of Juvenile 98.58