Gene detail

Detail information of GWHGAAEX005851/evm.TU.scaffold_172.5

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|110637313\|ref\|YP_677520.1\|	2.00E-06	hypothetical protein CHU_0899 [Cytophaga hutchinsonii ATCC 33406]
KOG	KOG1021	2.00E-150	Acetylglucosaminyltransferase EXT1/exostosin 1
nr	gi\|695039654\|ref\|XP_009407372.1\|	2.19E-177	PREDICTED: probable glycosyltransferase At5g25310 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q3E7Q9\|GLYT6_ARATH	3.00E-156	Probable glycosyltransferase At5g25310
trEMBL	tr\|B9RP20\|B9RP20_RICCO	8.00E-173	Catalytic, putative {ECO:0000313\|EMBL:EEF46938.1}
TAIR	AT5G03800_2	2.00E-150	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000178	313732	317334	-

Transcript Sequence
>GWHTAAEX005851 CTTCCTCCCACCATCATTTCATATCCCCGAGCCGACTGTTGTCTCTCCCTCTCCCAATCACAGAGAGAGAGAGCGAGGGGAAAGGGGTCTTTCTTCGCTACTTTCCTTGCCGCTTCCACTTTCCTCTGTCCTTTTGACAAGCAAAGAATTCCCATCTCGAATATAAAGAGCCATATATATAGAGCAGGAAACAAGGAAACCTCTCTCTCTCTCTCTCAGCGGAGAGAGAAAAGTGATGGGTGGCAGTTTGTGCACAGCGTGTCTTCTCATTGCTCTCATCCTCCTTCCCGTTGCTCTCATAATCCTCACCTCACAAACTCCCTCCCGCTCCGCCTTTCAGCTCATCCCTCGCCGCCGCTCGCCGGAAAGCGCTGCGCTGGCAACCGGCCGTGCTGGACTGAAGAAGGGACGCCGAACGGAGAGAGACGGGGTTGAAGCGGAGCTCTCCCGCGCCAGGGCGTCCATCCGAAGGGCCGCAACCGGAGCCGACCGGATCAATTTTTCCGGCGGGTTTAGCCGCCCGAGCGTTTACCGCAATGCCGCCGCCTTCTACCGGAGTTATGAGGAGATGGAGAAAACATTCAAAGTGTATGTGTACGACGAAGGCGAGGTGCCGCTTGTTCATGCCGGCCCCTGCAAGAATATCTACACTACTGAGGGGCGTTTTATTTCAGAGTTAGAGATGCTGCGTCATAGCCAAGCAGACGATTACTTGGAGATGACGACAAACGATCCCCGACGAGCCCACGCCTTCTTCCTTCCCTTTAGTGTGGCTCAACTAGTCCGATATGTGTATCACCCCAAATCTTATGACCACACCTCAATTCGCCGCTTTGTTTCCGACTATGTCGAAGTCATCGCATCAAAGCATCCCTATTGGAACCGCACTGCTGCTGCAGACCACTTCATGCTCTCATGCCATGATTGGGGGCCCCATGCATCCCGTGGAAACAAATTGTTGTACGAAAATGCCATCCGAGCACTATGCAACGCAAACACGTCGGAGGGATTCCGGCCGCGAAAAGACGTCAGCATCCCAGAGATCAACCTCCTCTCTGGCGAATTGCCGATGGAGCTGATCTCCCCGCCATCAACGACGGAACGCACACTCCTTGCATTCTTTGCTGGCGGGCTCCATGGCCCGATCAGACCAATTCTACTCCGCCACTGGAAGGATCGCGACCCGGATTTGCAAGTCCACGAGTACCTTCCCCCCGATGGCACCCATGACTACATGTCTTATATGCGACGATCCCGCTTCTGCCTCTGTCCTAGCGGCTATGAGGTGGCCAGCCCACGGGTTGTAGAGGCAATCTATGCAGGGTGCATACCTGTGATAATTTCGGAAAGCTACGTCCTGCCGTTCAGCGATGTGCTACAATGGAAGGAGTTCTCTGTGGCGATTTCAGTGGAGGATATACAACGTCTAAAAGAGGTGTTGGTGGCAGTGACAGAGGAAGAGACGAAACGGCTAATGGCAGGAGTTCGAGCGGTGCGCCACCACTTCGTGCTTAATCACCCGCCGCAGAGGTTCGATGCCTTTTATATGATTATGCACTCTGTTTGGCTTCGTCGGCTCAATATAAAGGTTGCCTGACTGGATTCTTGTTTTCTTCAAAATATCTCTTTTTTCCCCTCAAAATATAGATAATTTATTAAAAGTTACTGATCAGATTTAATTTGGGGTACCAATAATATGTGAAGGGATCGGATTTTATGTCGCAACTGTGCCTGTGTTGTGTAGTATATTGCATTTTGATTAGAGGGTCACACGTAATAGTTTTGTTGGTTTGTACTATGAGCATAAT

Network for GWHGAAEX005851

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03016.14	Exostosin	113	403	5.70E-63

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.560
SRP064423	SRR2545915	Juvenile tuber	0.390
SRP108465	SRR5643513	five period of Gastrodia elata	0.750
	SRR5643514	five period of Gastrodia elata	0.860
	SRR5643515	five period of Gastrodia elata	0.740
	SRR5643524	five period of Gastrodia elata	1.100
	SRR5643525	five period of Gastrodia elata	2.760
	SRR5643528	five period of Gastrodia elata	1.510
	SRR5643658	five period of Gastrodia elata	5.300
	SRR5643659	five period of Gastrodia elata	0.140
	SRR5643660	five period of Gastrodia elata	0.080
	SRR5643661	five period of Gastrodia elata	0.200
	SRR5643662	five period of Gastrodia elata	0.430
	SRR5643663	five period of Gastrodia elata	0.240
	SRR5643664	five period of Gastrodia elata	0.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.310
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.590
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.430
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.770
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.870
SRP279888	Gastro	Gastrodia elata tuber	3.46
	Juven	Juvenile tuber	0.22
	Mother_Gastro	Mother tuber of Gastrodia elata	2.74
	Mother_Juven	Mother tuber of Juvenile	0.42