Detail information of GWHGAAEX005854/evm.TU.scaffold_172.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|18977671|ref|NP_579028.1|1.00E-14pyrrolidone-carboxylate peptidase [Pyrococcus furiosus DSM 3638]
KOGKOG47558.00E-105Predicted pyroglutamyl peptidase
nrgi|661881156|emb|CDP15214.1|3.80E-124unnamed protein product [Coffea canephora]
trEMBLtr|A0A068V407|A0A068V407_COFCA1.00E-124Coffea canephora
TAIRAT1G567008.00E-105Peptidase C15, pyroglutamyl peptidase I-like

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000178407685443303+
Transcript Sequence

Network for GWHGAAEX005854

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01470.16Peptidase_C15111972.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0016920Molecular Functionpyroglutamyl-peptidase activity
GO:0005829Cellular Componentcytosol

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms115.850
SRR2545915Juvenile tuber103.430
SRP108465SRR5643513five period of Gastrodia elata65.540
SRR5643514five period of Gastrodia elata78.910
SRR5643515five period of Gastrodia elata68.560
SRR5643524five period of Gastrodia elata74.010
SRR5643525five period of Gastrodia elata152.820
SRR5643528five period of Gastrodia elata127.750
SRR5643658five period of Gastrodia elata151.790
SRR5643659five period of Gastrodia elata61.680
SRR5643660five period of Gastrodia elata63.200
SRR5643661five period of Gastrodia elata60.530
SRR5643662five period of Gastrodia elata59.080
SRR5643663five period of Gastrodia elata66.780
SRR5643664five period of Gastrodia elata55.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.230
SRR6049655Rhizomagastrodiae_C368-T10_good_147.550
SRR6049656Rhizomagastrodiae_C368-T07_good_174.600
SRR6049657Rhizomagastrodiae_C368-T07_good_177.960
SRR6049658Rhizomagastrodiae_C368-T04_good_1108.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1112.760
SRR6049660Rhizomagastrodiae_C368-T01_good_190.490
SRR6049661Rhizomagastrodiae_C368-T04_good_188.400
SRR6049662Rhizomagastrodiae_C368-T01_good_163.420
SRR6049663Rhizomagastrodiae_C368-T01_good_180.360
SRR6049664Rhizomagastrodiae_C368-T10_good_179.580
SRR6049665Rhizomagastrodiae_C368-T10_good_179.580
SRP279888GastroGastrodia elata tuber 71.30
JuvenJuvenile tuber80.59
Mother_GastroMother tuber of Gastrodia elata 172.09
Mother_JuvenMother tuber of Juvenile 74.11