Gene detail

Detail information of GWHGAAEX005861/evm.TU.scaffold_172.19

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434391665\|ref\|YP_007126612.1\|	2.00E-40	Unspecific monooxygenase [Gloeocapsa sp. PCC 7428]
KOG	KOG0156	3.00E-146	Cytochrome P450 CYP2 subfamily
nr	gi\|743882696\|ref\|XP_010909221.1\|	4.34E-166	PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis]
Swissprot	tr\|P58049\|C71BB_ARATH	8.00E-147	Cytochrome P450 71B11
trEMBL	tr\|A0A061FH75\|A0A061FH75_THECC	2.00E-149	Cytochrome P450, family 71, subfamily B, polypeptide 36, putative {ECO:0000313\|EMBL:EOY13814.1}
TAIR	AT5G25120	3.00E-146	ytochrome p450, family 71, subfamily B, polypeptide 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000178	927384	930228	+

Transcript Sequence
>GWHTAAEX005861 ATGGAATCATTTTGTATTAATTTATTACTAAAGCATGTTTCGTGCTCTGTATTAAATACCACAACAGCTCAATTAAGAAGCAAAGCAAATATGGAGGAGATCCTGCATCCCATTCCTCTACTGCTGGCCGCAGCATTTTGCTTCCTCTTCAGCAGCTTCCTCTGGCGGAGGCGGGCGAAGTCTCGGTGCCGGCCTCCAGGCCCTCCGGCGTTCCCGGTGATAGGCAACCTCCACAGCCTCCGCGATAACCCGCACGTTTCGCTCGACAGGCTCTCAAAAAAATACGGCCCAATAATGCACTTGAGGCTCGGCAGCGTCCCGACGGTGGTCGTCTCGGCCGCGGACGTCGCGGCCGAGATCCTCAGAAACCAAGACCACGTGTTCTGCAGCCGCAGCAGGATGGTCGCTCTCCACCGCCTCTCGTACGGTGGAAGCGACATCGGCTTCTCGCCATACGGCGACAGCTGGAAGCAGGTGCGGCGGGTGTGCAACACGGAGATCTTCGGGCCGGGCCGGGTCCAGTCATTCGCCGCGTTACGAAGCGAGGAGGTCAGCACGCTCCTGAGCACGGTGTCGAAAGCGGCGGCCTCTGGCGTTGCGCTGAATTTGACTGACGCGCTGCTCTGCTGCGTCAACAACATCCTCTTTCGCCAGATCTTCGGAGAGAGGATATCGGGCGACGGCGAGTGCGGAGCGAGCCCGCACCAAAACTTGCTCCGCAGGATCGTCACGCTGATGACCAGATTCGCCGCGGAGGACTTCTTCCCGCGCTTCGGCTGGATCTTTGACCGGCTCAGCGGGTATCACAGCAATCTGGAGAAGGTTTTCGGCGAGATGGATTCGCTCTTCGACGAGAAGATAAGAAGGAGGCTGCTGGCTGAAGATCCCGGCCGCCAGGAGGATTTCCTTGGCGTGCTTCTTGATCACCTGGCCAAGCAAGGCGATGCTTCTCTCACCATCAATCAAGTCAAAGCTGTTCTCATGAATATGTTTACTGCTGGAATAGATACATCTGCAGCAACAATAGAATGGGGAATGTCATTGCTGATAGGAAATCCAACAAAATTACAAAAGGCGGTCGATGAGGTACGAGCGGCCATCGGTAGCAAAGGAGAAGTGGTAGAAAGTGATTTGCAGCATCTCCATTATCTTAAATCGGTAATTAAAGAAACACTCAGGCTACATCCTCCCGGACCGATGTTGCCACCACGGGAGAGCATGAAGAGTACCAAGATAAATGGATATGATATTCCGGCAAAGACAAGGGTGTACGTAAACGTATGGTCCATAGGGAGGGATCCTAAGACTTGGGTTGATCCGGACCTTTTCTGCCCCGAGAGATTCATGGATAGCCCCATTAATTTCAAGGGAAGCTACTTTGAGTATATACCATTTGGTTCAGGAAGAAGGATGTGCCCAGGAATGGGACTAGGCATGGCTAATGTCGAGCTTATTTTTGCCAACATTCTCTATTGGTTCGATTGGAAATTACCGCGGGGCACGATCAAAGATGATGTGGACATGAGACCCGCGCCAGGGATGGTTACACCAAAGAAAGTGCCTCTTACTTTGATGGCGAAGGCTGTGTTTGCCAAATGATATGATTTGTCATATCTCAATAAATCCTGATGTTCTCCCAATGAGGGCTTGGAATGTTACAATTTGTGGTGTCATGCCATAAAACGCATATTTTCACACATATTTTGTATAAAATTCTAAATCTCTACAATGCTTACGACATTTGGAATGAACTTTCTGCTGTATACTCCTCGACTTCCCAAATTTGGCTTCAGCAACATAAAGTATCCAATTCACACGCTCAAGATAGGATCTCAACCAACATTCAATTTCTTGCCTCAACTAGCAATTTCGGCCATCTCCTTCGAATCAGCAAGTCATTTTTTGCACAATGACAGTGCTTGGATCGGATTAATCAGTGGTTGCAACTACTTTAACTACTATATTGAAACCTATTTCGGTTGACGAGAATTGTAGGATTTTGTTAAATAATAAAATTATGTATCCTTACGATTCAAACTCTAGAATTCCACCCATATCAAACATAGTTTTTGCTACTCTACAACATCAACTAAATTATACCATTTCACAACAGGGGTTGAGATTGCTTTAGGGGTTTTGGAAAATTTTCAGGCCAAGGTAGCTCATCCATTGTTTGTCAAGTATGTCATCGATTTGGTCATTCAACAGTTTATTGATACTACCGTCAATACATCACCTCATATCCTCCTCAATGACAACCACCACTATCAATACAACTCTTGACCGACTCAACTGAGGCTTGGTACCTTGATTCTGGTGCCATCCACCAAGTCACTCCAAATGTTCAGAACATTTAACTCGACAATCCTACACCGACACGAATATTGTTTACATTGACAATGGTCAAGGGTTTGATATACATAATACAAACACATAACTATCTTCCTCTTTCGCTCTTTTGACCATACAAAGTATTTTTTATGCTCCTCAACCTATTGAATTTCACCACCCTAATTTTTGCGTTGTGAAGGATATTCAAATTAAGATGGAGCTTCTTTGAGAAACAATTAAACACATATTGTATTGTATTCCACCTTTTACACTTGCTTTACATTATATTCTTGATTCAACCATAATTTGGCATAATAAATTTGGACATTCCAACCTCCAGACTCATATAATCGTACTATTTCGTCTACATGTTTCCCCTCAATCTATGTTTTAAGTGTCATTCATGAATGCAAGCTAAAATTCATAGCTTACCTATATT

Network for GWHGAAEX005861

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	65	519	1.70E-98

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B11

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0020037	Molecular Function	heme binding
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.480
SRP064423	SRR2545915	Juvenile tuber	76.590
SRP108465	SRR5643513	five period of Gastrodia elata	334.050
	SRR5643514	five period of Gastrodia elata	237.760
	SRR5643515	five period of Gastrodia elata	177.220
	SRR5643524	five period of Gastrodia elata	263.830
	SRR5643525	five period of Gastrodia elata	3.790
	SRR5643528	five period of Gastrodia elata	5.840
	SRR5643658	five period of Gastrodia elata	5.820
	SRR5643659	five period of Gastrodia elata	58.680
	SRR5643660	five period of Gastrodia elata	29.100
	SRR5643661	five period of Gastrodia elata	52.660
	SRR5643662	five period of Gastrodia elata	9.930
	SRR5643663	five period of Gastrodia elata	10.850
	SRR5643664	five period of Gastrodia elata	4.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	163.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	229.300
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	229.620
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	227.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	133.270
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	126.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	195.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	256.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	155.780
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	100.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	195.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	195.110
SRP279888	Gastro	Gastrodia elata tuber	11.38
	Juven	Juvenile tuber	462.72
	Mother_Gastro	Mother tuber of Gastrodia elata	3.85
	Mother_Juven	Mother tuber of Juvenile	107.17