Detail information of GWHGAAEX005866/evm.TU.scaffold_172.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33293.00E-59RAN guanine nucleotide release factor
nrgi|695008286|ref|XP_009390729.1|7.25E-82PREDICTED: probable ran guanine nucleotide release factor [Musa acuminata subsp. malaccensis]
trEMBLtr|M0SBD4|M0SBD4_MUSAM3.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P03160_001}
TAIRAT1G696803.00E-59Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017810754961095617+
Transcript Sequence

Network for GWHGAAEX005866

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04603.11Mog1101472.90E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms79.660
SRR2545915Juvenile tuber36.160
SRP108465SRR5643513five period of Gastrodia elata31.870
SRR5643514five period of Gastrodia elata44.660
SRR5643515five period of Gastrodia elata46.110
SRR5643524five period of Gastrodia elata49.860
SRR5643525five period of Gastrodia elata53.560
SRR5643528five period of Gastrodia elata116.510
SRR5643658five period of Gastrodia elata56.230
SRR5643659five period of Gastrodia elata38.890
SRR5643660five period of Gastrodia elata47.230
SRR5643661five period of Gastrodia elata37.840
SRR5643662five period of Gastrodia elata36.160
SRR5643663five period of Gastrodia elata33.150
SRR5643664five period of Gastrodia elata30.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.290
SRR6049655Rhizomagastrodiae_C368-T10_good_124.270
SRR6049656Rhizomagastrodiae_C368-T07_good_130.870
SRR6049657Rhizomagastrodiae_C368-T07_good_135.720
SRR6049658Rhizomagastrodiae_C368-T04_good_139.740
SRR6049659Rhizomagastrodiae_C368-T04_good_139.730
SRR6049660Rhizomagastrodiae_C368-T01_good_137.850
SRR6049661Rhizomagastrodiae_C368-T04_good_133.410
SRR6049662Rhizomagastrodiae_C368-T01_good_130.500
SRR6049663Rhizomagastrodiae_C368-T01_good_140.160
SRR6049664Rhizomagastrodiae_C368-T10_good_128.370
SRR6049665Rhizomagastrodiae_C368-T10_good_128.370
SRP279888GastroGastrodia elata tuber 26.57
JuvenJuvenile tuber13.14
Mother_GastroMother tuber of Gastrodia elata 57.96
Mother_JuvenMother tuber of Juvenile 28.93