Detail information of GWHGAAEX005867/evm.TU.scaffold_172.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743869769|ref|XP_010905887.1|1.67E-30PREDICTED: uncharacterized protein LOC105032979 [Elaeis guineensis]
trEMBLtr|M0X3Y4|M0X3Y4_HORVD1.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_56820.3}
TAIRAT2G329806.00E-07Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017811534011169562+
Transcript Sequence

Network for GWHGAAEX005867

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15003.5HAUS219811.40E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0051225Biological Processspindle assembly
GO:0031023Biological Processmicrotubule organizing center organization

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.670
SRR2545915Juvenile tuber14.290
SRP108465SRR5643513five period of Gastrodia elata8.190
SRR5643514five period of Gastrodia elata7.140
SRR5643515five period of Gastrodia elata7.870
SRR5643524five period of Gastrodia elata6.120
SRR5643525five period of Gastrodia elata4.970
SRR5643528five period of Gastrodia elata8.670
SRR5643658five period of Gastrodia elata8.130
SRR5643659five period of Gastrodia elata7.270
SRR5643660five period of Gastrodia elata6.240
SRR5643661five period of Gastrodia elata3.930
SRR5643662five period of Gastrodia elata7.980
SRR5643663five period of Gastrodia elata7.530
SRR5643664five period of Gastrodia elata7.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.080
SRR6049655Rhizomagastrodiae_C368-T10_good_11.820
SRR6049656Rhizomagastrodiae_C368-T07_good_110.430
SRR6049657Rhizomagastrodiae_C368-T07_good_15.980
SRR6049658Rhizomagastrodiae_C368-T04_good_15.840
SRR6049659Rhizomagastrodiae_C368-T04_good_16.520
SRR6049660Rhizomagastrodiae_C368-T01_good_15.180
SRR6049661Rhizomagastrodiae_C368-T04_good_16.980
SRR6049662Rhizomagastrodiae_C368-T01_good_18.380
SRR6049663Rhizomagastrodiae_C368-T01_good_17.750
SRR6049664Rhizomagastrodiae_C368-T10_good_114.320
SRR6049665Rhizomagastrodiae_C368-T10_good_114.320
SRP279888GastroGastrodia elata tuber 2.28
JuvenJuvenile tuber2.13
Mother_GastroMother tuber of Gastrodia elata 1.80
Mother_JuvenMother tuber of Juvenile 1.42