Detail information of GWHGAAEX005869/evm.TU.scaffold_172.29
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|720054288|ref|XP_010273002.1| | 5.52E-167 | PREDICTED: peroxidase 17-like [Nelumbo nucifera] |
| Swissprot | tr|Q9SJZ2|PER17_ARATH | 7.00E-151 | Peroxidase 17 (Precursor) |
| trEMBL | tr|M5VZ88|M5VZ88_PRUPE | 2.00E-157 | Uncharacterized protein {ECO:0000313|EMBL:EMJ06764.1} |
| TAIR | AT2G22420 | 2.00E-150 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000178 | 1232150 | 1239527 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005869
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 47 | 292 | 1.40E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.420 |
| SRR2545915 | Juvenile tuber | 13.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 156.520 |
| SRR5643514 | five period of Gastrodia elata | 84.550 | |
| SRR5643515 | five period of Gastrodia elata | 86.720 | |
| SRR5643524 | five period of Gastrodia elata | 90.940 | |
| SRR5643525 | five period of Gastrodia elata | 204.790 | |
| SRR5643528 | five period of Gastrodia elata | 164.990 | |
| SRR5643658 | five period of Gastrodia elata | 209.560 | |
| SRR5643659 | five period of Gastrodia elata | 55.400 | |
| SRR5643660 | five period of Gastrodia elata | 50.330 | |
| SRR5643661 | five period of Gastrodia elata | 54.610 | |
| SRR5643662 | five period of Gastrodia elata | 85.480 | |
| SRR5643663 | five period of Gastrodia elata | 72.440 | |
| SRR5643664 | five period of Gastrodia elata | 76.360 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 89.430 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 112.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 98.510 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 79.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 98.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 97.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 73.270 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 77.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 68.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 62.480 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 138.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 138.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 74.70 |
| Juven | Juvenile tuber | 87.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 68.27 | |
| Mother_Juven | Mother tuber of Juvenile | 75.31 |