Detail information of GWHGAAEX005880/evm.TU.scaffold_172.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194335955|ref|YP_002017749.1|3.00E-66NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1]
KOGKOG15022.00E-161Flavonol reductase/cinnamoyl-CoA reductase
nrgi|674919304|emb|CDY14000.1|1.21E-162BnaC09g38260D [Brassica napus]
Swissprottr|Q500U8|TKPR1_ARATH4.00E-87Tetraketide alpha-pyrone reductase 1
trEMBLtr|A0A078FHS0|A0A078FHS0_BRANA5.00E-163BnaC09g38260D protein {ECO:0000313|EMBL:CDY14000.1}
TAIRAT5G194402.00E-161NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017818581711904907-
Transcript Sequence

Network for GWHGAAEX005880

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase82439.00E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0050662Molecular Functioncoenzyme binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.010
SRR2545915Juvenile tuber3.700
SRP108465SRR5643513five period of Gastrodia elata147.530
SRR5643514five period of Gastrodia elata214.410
SRR5643515five period of Gastrodia elata139.170
SRR5643524five period of Gastrodia elata242.250
SRR5643525five period of Gastrodia elata14.100
SRR5643528five period of Gastrodia elata8.260
SRR5643658five period of Gastrodia elata5.570
SRR5643659five period of Gastrodia elata34.680
SRR5643660five period of Gastrodia elata16.350
SRR5643661five period of Gastrodia elata6.910
SRR5643662five period of Gastrodia elata20.040
SRR5643663five period of Gastrodia elata23.330
SRR5643664five period of Gastrodia elata22.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.400
SRR6049655Rhizomagastrodiae_C368-T10_good_170.880
SRR6049656Rhizomagastrodiae_C368-T07_good_160.860
SRR6049657Rhizomagastrodiae_C368-T07_good_131.850
SRR6049658Rhizomagastrodiae_C368-T04_good_129.040
SRR6049659Rhizomagastrodiae_C368-T04_good_140.960
SRR6049660Rhizomagastrodiae_C368-T01_good_134.530
SRR6049661Rhizomagastrodiae_C368-T04_good_116.020
SRR6049662Rhizomagastrodiae_C368-T01_good_1117.070
SRR6049663Rhizomagastrodiae_C368-T01_good_1127.180
SRR6049664Rhizomagastrodiae_C368-T10_good_179.550
SRR6049665Rhizomagastrodiae_C368-T10_good_179.550
SRP279888GastroGastrodia elata tuber 15.61
JuvenJuvenile tuber67.81
Mother_GastroMother tuber of Gastrodia elata 51.13
Mother_JuvenMother tuber of Juvenile 62.52