Gene detail

Detail information of GWHGAAEX005885/evm.TU.scaffold_173.7

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743799833\|ref\|XP_010925619.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Elaeis guineensis]
Swissprot	tr\|Q8W486\|Y1491_ARATH	6.00E-56	Uncharacterized protein At1g04910
trEMBL	tr\|D7TJN2\|D7TJN2_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI30704.3}
TAIR	AT1G29200	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000172	322006	329026	+

Transcript Sequence
>GWHTAAEX005885 AAACGTTCCTTCTCCTCTCATCTAACTATTATTTTCAATTCGGTAGATTGGCAGGTCGGTTTCTTCAATGGATCTTTTCAAAAGAAGCAGAAGGCCTTCTTTGGGGCCTTACCGCCTTGAGACAGTAGGATTGTTTGATGGGAAAGGAAGGGCAGAGTTTAAGCGCGCAGGTGCTGACGAAGAAGAGCTATCTGGTTTCGAAGCCCTCCAAAACAGGAGCTTGGGGTAAGAGGAAGGCATGGATGTGCATTCAGTTGAGAATGGTGGGTTTTGTGTTCGGGCTATTGGGATCATTCTTCCTCTTTGATTCCCTGATGCTCAGTGTAGTTCATCATGTTAGTTTTCGGAAAGGTCTCCAGAGCAGCAAAGCAAGGCAGGCGCAGGATGGAGGGACTGTGTCTGATATCAATGCAGAAAATACTGTGAAGCTAATGCATGAGCGCCTTGTAAAGTTTGCTTCTGCTTCCTTGTCAAAGAATGAATTTCAACAAGATTCAATTGAACAATGGAAGGAACCTTATGCTCAAGCATCATCGTGGGAACCATGTGCACATAAGCATAGCAGTGCTGTTCATCAAGAAAATGCAGTGAATGGCACTGGCTTTATCTTAGTAAGTGCAAATGGTGGTCTGAACCAACAAAGAGTAGCTATCTGTAATGCCGTCACCGTTGCTGCCATGCTCAACGCATCCTTAGTGCTCCCCAAATTTCTGTATAGTAGTGTTTGGAAGGATACGAGCCAGTTTGGCGATATATATCAGGAAGATTACTTCATAGAGTTGTTGGAAAAGGATGTGAGGATCGCGAGAGAGTTGCCTCGCCATCTTCAGTCATTGAATCTTGAAGCAGTCGGCAGCAAGCTAAGCGACGCGGACATCGCGAAAGAGTCCAAGCCAGCTTATTTCTTCAGAGTCGTTCTTCCGCTTTTGCTGCGAAACGGTGTCGTCGACTTCCACGGGTTCGGAAACCGGCTTGCATTCGACCCCATGCCAGCTCATCTCCAGAAACTAAGATGCAAATGCAATTTCCATGCATTAAAATTTGCCCCAAGAATTCAAAAGATCGGATCTTTGCTCGTCCGACGGATTCGAAAATACGATTATACGATTTCTGAATTGGACAACCAGCTGCTGGGAGAGCAGATGGAGAGCAGCAGCAGCATTTTGGCCAAAAGCATTACCTCTGGAAAACCTCTCACATATCTCGCTCTGCACCTGAGGTTCGAGATGGATATGGCGGCATACTCTGCCTGCGATTTTGGCGGAGGAGAGAAAGAAGCAAGGGAATTGCAAGCGTACAGAGAGATTCATTTCCCTGCACTCGTAACACGAATGAAAGAGAATGGATCGTCGTCTCCGGCCGAACTGAGGAGGCTAGGAAGATGCCCGATGACGCCGGAGGAAGCAGCGCTGATGCTCTCTGCGCTCGGATTTAGAAGAAGAACTTACATATATCTAGCCGGATCTGATGTTTATGGAGGCAGATCGAGAATGCTTCCGTTCACAGGACTCTACCCTAACTTGGTGAAGAAGGAGGATCTTCTGAGACCGAGCGAGCTCGCACCCTTCAGAAATTTTTCTTCCCAGCTCGCAGCTCTGGACTTCATCGCATGTGCTGCTGCGGATGTATTCGCCATGACGGATTCCGGCAGCCAGCTGTCGTCTCTCGTGACCGGCTTCCGTACGTATCACGGAAGGGGGGAAGCGCCTAATCTGCGCCCTAACAAGAGGAAATTCGCAGGGATTTTGTCGGAGATTGGCGGGTTAGGGTGGGTCGAGTTCCAAGAGCGGGTGAAGAAGATGATTGAAGAGAATCGGAGGAGGGTTCAGGCGAGGCGCACAGACCGCAGCATTTATAGGCAGCCGAACTCTCCGGAGTGTATGTGTAGGGTATCGGACTCCGGCTGATTTTTTGAGAGCAAATTTGCTTTTTTTATCTGCATAATATAATTTATTTATGCATTTTCTTATTGTGGAATCGTGTTCACAGTTCATTATCCCAAGTTTTTTTGTTTAAATTTTATCAATCACACGCTCACCTAATTAGATATGAA

Network for GWHGAAEX005885

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	156	518	1.50E-66

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.430
SRP064423	SRR2545915	Juvenile tuber	6.950
SRP108465	SRR5643513	five period of Gastrodia elata	4.400
	SRR5643514	five period of Gastrodia elata	3.820
	SRR5643515	five period of Gastrodia elata	3.990
	SRR5643524	five period of Gastrodia elata	4.920
	SRR5643525	five period of Gastrodia elata	22.240
	SRR5643528	five period of Gastrodia elata	23.640
	SRR5643658	five period of Gastrodia elata	59.610
	SRR5643659	five period of Gastrodia elata	5.290
	SRR5643660	five period of Gastrodia elata	4.220
	SRR5643661	five period of Gastrodia elata	6.210
	SRR5643662	five period of Gastrodia elata	4.760
	SRR5643663	five period of Gastrodia elata	5.480
	SRR5643664	five period of Gastrodia elata	5.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.060
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.910
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.960
SRP279888	Gastro	Gastrodia elata tuber	2.99
	Juven	Juvenile tuber	1.69
	Mother_Gastro	Mother tuber of Gastrodia elata	4.05
	Mother_Juven	Mother tuber of Juvenile	2.28