Detail information of GWHGAAEX005899/evm.TU.scaffold_173.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|296269402|ref|YP_003652034.1| | 3.00E-22 | serine/threonine protein kinase [Thermobispora bispora DSM 43833] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|695006756|ref|XP_009389895.1| | 0 | PREDICTED: mitogen-activated protein kinase 1-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q07176|MMK1_MEDSA | 0 | Mitogen-activated protein kinase homolog MMK1 |
| trEMBL | tr|M5VPZ6|M5VPZ6_PRUPE | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
| TAIR | AT2G43790 | 0 | MAP kinase 6 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000172 | 1217807 | 1274998 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005899
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 65 | 345 | 6.90E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14512 | MPK6 | MAPK signaling pathway - plant | map04016 |
| Plant hormone signal transduction | map04075 | ||
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 47.760 |
| SRR2545915 | Juvenile tuber | 60.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 56.630 |
| SRR5643514 | five period of Gastrodia elata | 64.640 | |
| SRR5643515 | five period of Gastrodia elata | 53.150 | |
| SRR5643524 | five period of Gastrodia elata | 59.530 | |
| SRR5643525 | five period of Gastrodia elata | 88.270 | |
| SRR5643528 | five period of Gastrodia elata | 78.690 | |
| SRR5643658 | five period of Gastrodia elata | 95.380 | |
| SRR5643659 | five period of Gastrodia elata | 34.140 | |
| SRR5643660 | five period of Gastrodia elata | 32.680 | |
| SRR5643661 | five period of Gastrodia elata | 33.710 | |
| SRR5643662 | five period of Gastrodia elata | 38.750 | |
| SRR5643663 | five period of Gastrodia elata | 42.220 | |
| SRR5643664 | five period of Gastrodia elata | 41.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 61.850 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 82.120 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 63.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 62.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 65.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 73.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 60.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 58.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 55.560 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 56.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 73.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 73.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 47.96 |
| Juven | Juvenile tuber | 71.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 56.38 | |
| Mother_Juven | Mother tuber of Juvenile | 73.97 |