Gene detail

Detail information of GWHGAAEX005911/evm.TU.scaffold_173.45

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672110235\|ref\|XP_008794246.1\|	5.17E-59	PREDICTED: uncharacterized protein LOC103710346 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|U5FM23\|U5FM23_POPTR	1.00E-43	Uncharacterized protein {ECO:0000313\|EMBL:ERP52198.1}
TAIR	AT5G61040	6.00E-31	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000172	1744613	1768584	+

Transcript Sequence
>GWHTAAEX005911 CTTCCATTTGCGATACTGGACTAAGTCTTAAAAGCGCGCCTAGAGGATTTCGCTGTGCTTTTCTTTACCTGGTGTATCTTCTCATTTCGTTTTTGAACGATCACACCATCCAATACTAGTCTGCGAAACCTTTTTTGGTTTTTTCCTCAACTTCTAACTTATTATGCATTGACAATGGTGAATCTGATCCATGTACAGTGGCTTGCACTATTTTTTTCCAAATGGTCCAGCAGTTCCTCCGACTCGGATTTCTGATGCTGTGGATCTCAGGGTTTTAGATATTTTGGGAAAAAAGGCATGGTTATTGATTAATGGACTGTCTTTCTGCTCATTCATGTGTTGTTGGTATTCATTGCTGAGTAATTGCATTGGCGCTGCTCTTGTTCAGTGGGAGGCGGGAGAAGTTTTAGGAAATTATATACACGTTCTCCATTCTTACACAAGGAAGCGGTTGTCATTAATTTTGATGGATAAAAGGGGCGATCATAAACACTCGCATTCGGAATATTTCCCTCTCTGGAAGTTCTTTGTGAAACACGAGGAACAAGATGCCTCTTTTAATTCTGAAATGATTTTTGACAAAGACATGAGAAGTTCTTCAGACGTCTCTTCTCAGCCAGAGGCGGTATCTTCTATCAGCGGGATTTGCAATGAAATTTTGAAGGAAGAATTTGTGAGGGACAATGGATCATTGTTGAGTTTGCAGCCATTGGTTATGAAAGGGCTGAAATGCTCCAAGGGGGAAGAGGAGGTCTCTAACACTTCTAGTCGTTCGAGTTCTGATTGGATTAACTTTTCACAGACCTCACATTGTTTTCCGCAAAAATTTAACTCTAATAGCAGTTCAATTTATTCCAAATTGAAGTCGAAAGATAAACATAACTTTAGGCCTGTAACTTTTACTGAGAATATATTGATGTCTCATTTTTGTAGTGAAATTGGCACAGCTGAGGAGTATACTTTTAGCTTAAATCCTTCTTTACACGTAAAAGTCAAGAGCTCAAGGAACAATGAAACAAGCAGGATGAGAGTTGATTCGTTAGCAGAACAGCTTGAAAATAAACATGACGAAGATTTTGTCTCTGGTATATCATCAGAGAAAAAAGAGCCTTTTGATCACCTTAGTGCTTCAGTTAACGGGGAACTGACAGCCGTGATTAATGATTTTTATCTTGCACCCCAAAAATTGAGAAAAGAAAGAAAGTTTAGAGAAGCTATGACAGAGAGTTTTGATACTTCCTGCTCCCAAAAAAAATGCAGGACTTCTAATCCACCAGGTTCACTTGACGGACTTCTACTTTTTCTTGTTGGCATCGCTGTTGGTGTCACATCCTCTTTTCTCTCAAATAAAACAGAACTTAAGAGATTAAATGAGCTGTTGGATGACAAAAAAAATCTTGTTCGTGATGCACATGAAGGGCTCGAGATGAAAGATTCATTAACTATGAAGGAACTAGACAATGAAACTGGTGAAAATGAACTTGAACGATATAATCTTGACAAAGCCAACGAGGATTTGCAATTCCAAAATTCAAATTGTCATGCTTCTGTGCTGAAAATGGATAATCATGGTGATGTACACATGATAAAGGTTGGAGGGAACTTTGAGGCGCTGAGTGAAATAGAAGCAGAGCTTGAAGCGGAGCTTGAAAGATTGGAGCAAAACATGAAGGCATCTTGTATAGTGCAAAGGACATCAGCTTTTATTGAGATTGATGATTCAGAAATTTCAGCCGAAGTTTCTCAAGGCGAACTCCGAGAAGATCTGCTCGTCGTCAATGGAAGTAGAGAATACCTAACAGATGATGACAGTAACAAAGATGGAGGCAGATGTGCCACAACTCGCCCATGCCCTGTCTCTCCTAGAGAGCTCAGCTTACGGCTTCACCAAGTAATAGAAAGCAGGCTCAAAGAAAGGGTCAAAGAACTCGAGAGTGCACTGGAGCAAAGCCGGCAGAAGCTCAAGCTTTTTGAAATGGAGAGGTCGAGTGTTGTGCTTCCGATGCCAAATTTGCATGATGTTTGCTGCTCAAGCCAAGATAGCCCAGAATCCTTAAAGCATACTGATAACTCCAGTCAACGGTCAGATTCGTCGGGAGATGAATCATCGTTGGCATTTGATGAAGCTTATGAAGAGTTCAGTAGGTTGACTGAACCTGCGGATGAGAAAGTTTCCTCTTTTATTAGTACTAAAATTGGGCTTTTTTCAAAAGACGATGCATCATATGACATTTCAGGTACGGATGAAAACGATGAAGATGATAGTTTTGATGAGGGGAGGGAATTGATACAGAGAATAGTGGAGAAAACCAAGCAGGGATCATCTGCTGTTTTAAATGCACAAAGAATGTTCTTTCTGATGGATTTGTGATTATTTTAGAGCAGTCTATGGCAGATTTTACTGCTTTCAGAATGCGCTGCATTTTGTATTTAAAAGGTAATTAAGCTCCCTTTTTATTTGCCCTGAAATTTGTGTATTTGTTAATTTTGCTGTATACTAGTGCTTCTAGCTCATTTAATCAGTTCATTGCACAGAAAACTGTTTGAAGAGGCCTATAAATGCATGAGTTTGAATTGCGCCTACCTTGTACAAATTTGGCATTTGGTCAAGCC

Network for GWHGAAEX005911

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.300
SRP064423	SRR2545915	Juvenile tuber	3.350
SRP108465	SRR5643513	five period of Gastrodia elata	1.640
	SRR5643514	five period of Gastrodia elata	1.050
	SRR5643515	five period of Gastrodia elata	1.420
	SRR5643524	five period of Gastrodia elata	1.190
	SRR5643525	five period of Gastrodia elata	1.030
	SRR5643528	five period of Gastrodia elata	0.710
	SRR5643658	five period of Gastrodia elata	0.330
	SRR5643659	five period of Gastrodia elata	3.020
	SRR5643660	five period of Gastrodia elata	2.820
	SRR5643661	five period of Gastrodia elata	2.660
	SRR5643662	five period of Gastrodia elata	2.600
	SRR5643663	five period of Gastrodia elata	2.620
	SRR5643664	five period of Gastrodia elata	2.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.660
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.520
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.180
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.180
SRP279888	Gastro	Gastrodia elata tuber	1.15
	Juven	Juvenile tuber	1.15
	Mother_Gastro	Mother tuber of Gastrodia elata	1.09
	Mother_Juven	Mother tuber of Juvenile	0.91