Gene detail

Detail information of GWHGAAEX005913/evm.TU.scaffold_173.48

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672121306\|ref\|XP_008783950.1\|	0	PREDICTED: uncharacterized protein LOC103703030 [Phoenix dactylifera]
trEMBL	tr\|M0T4G0\|M0T4G0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P05620_001}
TAIR	AT5G46220	1.00E-164	Protein of unknown function (DUF616)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000172	1896897	1898806	+

Transcript Sequence
>GWHTAAEX005913 GGCAAAAATTAAATACACTTGAACCGCAATTTAAGCTCATCTTATTCAGCAATCACGTACGAACCGCTCCGGTTCAACCCGGCCGTCCCCAGCTTCGTCGGATCCGCACCGAAAACTAAACCTCGACGAACCGTAAACCGCCGCAGCCATGGTGGGCCCACCACTCTCACGGCCCCACATCCCTATTAACGAACAAACAAGAATCAATCGGCTTCTTCCTTCCTTCTTTCTTCCATCTTCCGCTAACCTCATCGAATTATTCTATTAGCACCACCGCACATGGGTTGGGTGAGACTGACTCCTCCCCTCCTCTTTCAATCCAAGCTGCTCTGCCTCTCTCTCCTCTACCTCCTCACGACCGTTCCTTTCTCCCTCTACGTCTCCTTCTCCAAGCGCGGCTGCCTCTTTAATTTCCCTCAGCCCCTCTTTCATTACCCCTCAACCTATGGCGAGCACAGCCACGCTATTCCCGCCTCCCGCTCCTCCTGCGCCTCCCCAATTCTCTTTCCAGATTACGGCGCAGCCTTCGACGAGATCCGCAGCCTCTGCAGAAATTCCTCCTCCCCTGTTCTCAAGTACATGCAGGGGAATCGCCGGACTTTCGCCGGTAATTTCTCCGCAACGTACCGAAGATCCTTTTTCAATCTGGCCGACGATCCTCGTCCCATCCCCTGCGGCTTCCTCCGCGAATTCATCATCAAAGACTCAGACAGAGCTGCCATGGAGCGCTGCCACGGCGTGGTCATCATCTCCGCGATCTTCGGCGATCACGACAAGATCCGGCAGCCGAAAGGATTGGGATTTCGGACGCACGAATTCGTCTGTTTCTTCATGTTCGTCGATGATTCCACTATCCGAGGTCTCAATTCTCACAGAATCATCATTCCCGGTTCCGGAAGCAATGCGGTTGGGGTTTGGAGAATTATCCGCCTTTTCTCCGGCAAACTTCCCTACGATAATCCGGCGATGAACGGCGTCATTCCAAAGTACCTCCCTCACCGCCTCTTCCCCAATTCGAAATTCAGCCTCTGGATCGACGCGAAGCTTCAGCTAACCGTCGATCCTCTGCTTCTCGTTCATTCCCTCCTTGTCTCCGTAAACGCTGACATGGCCGTCTCTAAGCACCCCTTCAATATTCACACCATGGAGGAAGCCATTGCGACCGCCAGGTGGAAGAAATGGCTGGATGTCGAATCGTTGAGGATTCAGATGGAGACGTACTGTGAGAACGGTCTTCAGCCTTGGTCGCAGAGCAAGTTGCCGCACACGACTGATGTGCCGGACACGGCGATGATAGCGAGGAGGCACGGGACAGCCAGCGATCTGTTTTCCTGCCTTGTGTTCAACGAGCTTGAAGCGTTCAATCCCAGGGATCAATTGGCGTTTGCGTACGTGAGGGATCTGATGAGCCCTCGGATCAGAATAAACATGTTCGAGAACGAGGTGTTGGAACAGGTGGCGATAGAGTACCGGCATAATTTGAAACGGGAGGCTGGTGCGCCGGCGGCCAAGCTTGCGGGAAGAGCGGCGGCAGCGGCAGATATTGGAGGGAGTAAATGCGAAGATTACCTTCGCAGGATGTGGGGAGAAACCACTGATGATAGTGATGGTAGTTGAATTATCAGATTCCTTCTTTGGATAGGTTTAAAGGCAAATATTCATTGGATTTGAGATTTTTGTTCTTGAGCTCATTGATTTTTTGGGTGGTTAATTGTTTTGTCATTAATAATAATAAAAAAAGTTTAATAAATTTTGATATTCAAT

Network for GWHGAAEX005913

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04765.12	DUF616	104	399	1.40E-102

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.890
SRP064423	SRR2545915	Juvenile tuber	4.760
SRP108465	SRR5643513	five period of Gastrodia elata	8.810
	SRR5643514	five period of Gastrodia elata	8.580
	SRR5643515	five period of Gastrodia elata	5.760
	SRR5643524	five period of Gastrodia elata	6.370
	SRR5643525	five period of Gastrodia elata	11.930
	SRR5643528	five period of Gastrodia elata	14.300
	SRR5643658	five period of Gastrodia elata	9.900
	SRR5643659	five period of Gastrodia elata	7.550
	SRR5643660	five period of Gastrodia elata	6.590
	SRR5643661	five period of Gastrodia elata	6.300
	SRR5643662	five period of Gastrodia elata	7.830
	SRR5643663	five period of Gastrodia elata	6.720
	SRR5643664	five period of Gastrodia elata	12.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.320
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.570
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.570
SRP279888	Gastro	Gastrodia elata tuber	13.73
	Juven	Juvenile tuber	9.42
	Mother_Gastro	Mother tuber of Gastrodia elata	12.89
	Mother_Juven	Mother tuber of Juvenile	5.76