Detail information of GWHGAAEX005924/evm.TU.scaffold_174.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26062.00E-110OTU (ovarian tumor)-like cysteine protease
nrgi|659101483|ref|XP_008451627.1|1.05E-131PREDICTED: OTU domain-containing protein 6B [Cucumis melo]
trEMBLtr|W1P1Z9|W1P1Z9_AMBTC5.00E-131Uncharacterized protein {ECO:0000313|EMBL:ERN00980.1}
TAIRAT3G629402.00E-110Cysteine proteinases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000176469023498405+
Transcript Sequence

Network for GWHGAAEX005924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02338.18OTU1903321.20E-30
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyOTU

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.120
SRR2545915Juvenile tuber38.000
SRP108465SRR5643513five period of Gastrodia elata38.120
SRR5643514five period of Gastrodia elata37.420
SRR5643515five period of Gastrodia elata41.770
SRR5643524five period of Gastrodia elata43.910
SRR5643525five period of Gastrodia elata53.040
SRR5643528five period of Gastrodia elata62.130
SRR5643658five period of Gastrodia elata42.440
SRR5643659five period of Gastrodia elata49.540
SRR5643660five period of Gastrodia elata52.640
SRR5643661five period of Gastrodia elata50.500
SRR5643662five period of Gastrodia elata51.540
SRR5643663five period of Gastrodia elata50.260
SRR5643664five period of Gastrodia elata53.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.290
SRR6049655Rhizomagastrodiae_C368-T10_good_122.960
SRR6049656Rhizomagastrodiae_C368-T07_good_128.750
SRR6049657Rhizomagastrodiae_C368-T07_good_130.820
SRR6049658Rhizomagastrodiae_C368-T04_good_136.620
SRR6049659Rhizomagastrodiae_C368-T04_good_138.090
SRR6049660Rhizomagastrodiae_C368-T01_good_137.770
SRR6049661Rhizomagastrodiae_C368-T04_good_131.560
SRR6049662Rhizomagastrodiae_C368-T01_good_128.550
SRR6049663Rhizomagastrodiae_C368-T01_good_132.830
SRR6049664Rhizomagastrodiae_C368-T10_good_130.360
SRR6049665Rhizomagastrodiae_C368-T10_good_130.360
SRP279888GastroGastrodia elata tuber 68.06
JuvenJuvenile tuber60.94
Mother_GastroMother tuber of Gastrodia elata 40.55
Mother_JuvenMother tuber of Juvenile 58.88