Gene detail

Detail information of GWHGAAEX005935/evm.TU.scaffold_174.30

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743848455\|ref\|XP_010939363.1\|	1.30E-155	PREDICTED: WAT1-related protein At1g21890 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9ZUS1\|WTR13_ARATH	4.00E-116	WAT1-related protein At2g37460
trEMBL	tr\|M0TH44\|M0TH44_MUSAM	2.00E-152	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P13070_001}
TAIR	AT2G37460	1.00E-115	nodulin MtN21 /EamA-like transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000176	1068031	1070319	-

Transcript Sequence
>GWHTAAEX005935 GAATAGAGTTTATATATTTTAATAAATTTCTAATATATTATGCTGTCAATAATAATTCGAGCTTTGAAGCATGAATAAATATGGGCAGCTAAAAGTGAAGCTTTCCGGCTGAGTGGAGGCGCAGAGGAGTAGTAATTTCTGGGAATAATTTAAATGTGGCTGCTGAAATCCGCATAGAGCTCTTCCGGCTCTGCTATATAAAGGTGAGGAAACCTTGCGGTGCTGTGCATCAAATCAGCTGATGGAAAGCATTAGTCTGATACAGAAGCTGAGGCCATGTGTGTATATGGTGCTGCTGCAATTTGGCTATGCTGGCATGTACATAATCTCGACCGCAACACTGAAGCATGGAATGAACCACTATGTTCTGGTCGTCTATCGCAACCTTATCGCCTTTGCTGTCATCGCCCCATTTGCACTCTACTTCGAGAGGAAGAAGCAGCCAAAGATTAGACCGCTCGTCTTCCTCAAGATAGTAGCCCTCGCTATTCTGGAGCCTGTTCTAGACCAGAATTTCTATTACGTGGGAACCAAGTTGACAGATGCAGGATTCACTGCTGCGTTTTACAACATAATTCCAGCAATCACTTTCGTGCTTGCCTTTATTCTAAGAATGGAGAAGATAAGTATAAGGAGAAGCCGCGGACAGGCAAAGGTGATTGGGGCAGCGATAATGCTGATCGGTGCTATCTTAATGATAGTGTACAGAGGCCCCATCGTGGAGCTCTTCTGGTCGAATGGGCGAAGCCGGCAGTCGGACTCCGCCAGCCAAGCAGGCGAAAGCGTGCTCAAGGGGAGCTGCATGATGTTCGCCGGCTGCCTCTCTTGGTCTGCTTTCTTCATCCTTCAGTCGAACACGCTGGAGTCGTTCCCTGCTGAGCTGACTCTGACAGCTTTGATATGCGCGATGGGAGCGTTGCTCGGTGCAGTGGTGGCGTTGGTGATGGAAGGAGGGGCCGCCCAGCCATGGATCATCGGTTTAGACATGAGGCTTTTCACAGCAGTCTATTCCGGAATCGTCTGCTCCGGCGTTGCTTACTATGTTCAAGGAGTGGTTATGCAAGAGAGAGGACCTGTTTATGTCACTGCCTTCAACCCTCTCAACATGATCATAACCGCATTCATGGGATCCATCATTTTAGCAGAACAAATCACCCTCGGAAGGATCATTGGCGCGGCAATCATAGTCATAGGGCTTTACTGCCTCGTATGGGGAAAGAGCAACGAGCATCTTCCTACTTCATCAGGCAACGCCGCAGTGAAAGAAGCTGAGGAGAATCCCGTGTAAATTATCCGCTGAGCATTTTAACCCATATATTCTGCGCTGAAGGCTAGCCAGATGGCCTGCTCATCCACCGGCTCGCACCCATCTGTCCTGTCCCTCTCTGAATAACAACTGCTCTTAACATTCTTTTGCTTTCAATCCTGCCTCTCTAAAGCGCATCTTTCAAGTGAAATGTTTCTTTCGTTTGCTAGATTTAAATAGAAAGTGATGAACAAATAAGGCCTCGGCCTCTCCATGATTAAACTACTTTGAAGCTGTGGCCTCAAATTGTCATCACTTTCTTGCTCACGTGATGCCTTTGACTTCAATGGGAAGTTCCTTTGCATTGCGAATTTTCTGTGTGGCTTGATTGAGGCTAGATTGACTATAAAAGGTGAGTATCTTCAAGTTCTTTCTCGCTTGATGTGATGTCCTTTCTTACTTGATGTAACTGTGCTGATAGCCTGCTTTCCATAGTAAGCACATAAATGCAATTCACAATCCTAATGCGGAAAGTGTTCTTTTTTTTCTTAAGAAATATAATGTCATTCTTAAATTATTCT

Network for GWHGAAEX005935

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00892.19	EamA	13	153	1.40E-12
PF00892.19	EamA	184	323	4.10E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016020	Cellular Component	membrane
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.040
SRP064423	SRR2545915	Juvenile tuber	0.050
SRP108465	SRR5643513	five period of Gastrodia elata	0.170
	SRR5643514	five period of Gastrodia elata	0.290
	SRR5643515	five period of Gastrodia elata	0.040
	SRR5643524	five period of Gastrodia elata	0.220
	SRR5643525	five period of Gastrodia elata	0.040
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.040
	SRR5643660	five period of Gastrodia elata	0.080
	SRR5643661	five period of Gastrodia elata	0.080
	SRR5643662	five period of Gastrodia elata	0.040
	SRR5643663	five period of Gastrodia elata	0.060
	SRR5643664	five period of Gastrodia elata	0.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.080
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.180
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.040
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.160
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.160
SRP279888	Gastro	Gastrodia elata tuber	0.14
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.15
	Mother_Juven	Mother tuber of Juvenile	0.00