Detail information of GWHGAAEX005943/evm.TU.scaffold_174.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG09519.00E-20RNA helicase BRR2, DEAD-box superfamily
nrgi|670445695|ref|XP_008663117.1|4.16E-21PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Zea mays]
Swissprottr|Q0WT48|DNJ21_ARATH4.00E-20DnaJ protein ERDJ2A
trEMBLtr|K7TJM1|K7TJM1_MAIZE4.00E-21Uncharacterized protein {ECO:0000313|EMBL:AFW57973.1, ECO:0000313|EnsemblPlants:GRMZM2G009346_P01}
TAIRAT1G79940_29.00E-20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017615574851557685-
Transcript Sequence

Network for GWHGAAEX005943

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09540SEC63, DNAJC23 Protein export map03060
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata27.940
SRR5643514five period of Gastrodia elata9.750
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata18.910
SRR5643525five period of Gastrodia elata107.430
SRR5643528five period of Gastrodia elata11.140
SRR5643658five period of Gastrodia elata18.670
SRR5643659five period of Gastrodia elata7.220
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata8.570
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata13.310
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_113.890
SRR6049658Rhizomagastrodiae_C368-T04_good_16.610
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_112.990
SRR6049665Rhizomagastrodiae_C368-T10_good_112.990
SRP279888GastroGastrodia elata tuber 18.38
JuvenJuvenile tuber18.52
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00