Gene detail

Detail information of GWHGAAEX005944/CADD00487.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000176	1563497	1566004	-

Transcript Sequence
>GWHTAAEX005944 AAAATATGAAGTTATCTTGAATTTTACATGTATCAAAATAGTTAACAAAAGTAACGTATGTATTGTAAATCATTGAACAATTCTACACACTCGAACCCTTTCTAAAAACGACTCAAATACAGTGATAAAATCTCCTTATAGATCAAATCTTGCAGTATTCTACATTTCCAAATAAAAACCCAACTTAAAAAAGAGGTATGAGCTTACACAACGCAACAACCATGCACGTGAAGAAGAGCACTCTCTACAAACCTCAGGTCAAAATCACATCTTGCATTTCACCGGAGCCAACAAAGTTTTCAAACAATGACTATTCTCCTCCTTCCTCAATTTAGGTTTCTTCTTTTACCTTTGGCAGCCTCAAAATGTTCCAAATAATCCAAAAATAAGCCCAGTTCACTTGCTTATATAAATATGACTAGCACCTAAAAGCATTCCTGGGGCATGGGCACCTAGCGGGCTAACCAGCACCTAAAAGCATTCCTGGCGCATGGGCACATCTAGGATTCTTATAAGAACATTTGTCAGCCACCTAGGCGCCAAAAATGTTTGCCGGGCACCCAAACCTCGGCCAAACAGCACCTCGGAACAGTAAACTAGGCACCCGCTTCTCAGGCTAACTTCACCTAGCCCACGCTTGGGTGCGGTGCAGGAGGGCTGAATCTAACATGCCCTATAAACAAACCACACGCATGAGGGCATTTATATCAGTTTATCATGTATAAGTGTATCACATGACATCATCAAAATCTTCAAACAGTAAATCAGTATCAAGAGCATTGGTCTGGTATCGCTTCAACAATTCCAAAGGATATTTTTAGAGAAGCAATATTGCTACGATGAAACGTACGGGCAGCGCTTTCCTCAAGTGTTCAGAGTGATAGATTCTCTCGCATATAAAACAAAAGTTAAACAGAGAATCAATTAACTGGAAGCACGCATGAGAAGAGGGGGTCACATCGCCCAGTCAAAGCAACAAGGAAGTGTTCTCAATGATTTGACGGATCATACTGAGATAGAATCACAGACGATCCATACATCACCAGTCCTTCGCAGATCAGTCTCTCAAACTGAGACGAGAAAAAAATATAAAAAAAAAATTCTTTCAGGGAAATAAAATTATAAAAATAAAAAGTAAGAACATTGGGGAATGAAAGAGAGATTTTGTAGAAAATCAGTCCTAGATTGCATATGGGATAGTTATTCATGAGAGTTGTTTTCAGGAAGCTGTGACTAGCTGCTTCTCTTCATCTAACATAGGAAACTTAGTATTTTTCATTGTTCATCCCACAACCACCGATGCCCCCGCCGACTGCACGCTGTTGTAGCCTTGCACAGCAGTAAGAAGGCAGAGATTCAAACAACAGCAAGAGCAACTTCCTTTGCAGCAATTTCTTTATATAGCTCCCAATAAATTTGGTGGAGAACAGCAATTTCCATAAAAGAGCCCCTTACTCCGGCATGTAAGTAAACAGCTGGGAATCACGTATGTAGCAAGCGTGCCATGAGAATCCTCAGAGCAATTGGATGTAAGAATAAAAAAAGATGTTCTCTGTCTGTCACACAAAATGAGAGCTTGGGTTTTTCCATTAAGAGGAAGAAACTTTAGCCCAGCAACAGTATAGTGCAGCATAGCTTTTTTGTGACCGTCTTTTCAATTGCTACAGAGACAGATGCCTAAAAAAAGGCTACATAGCCATACACCTCCTTTCGCTCTTGGGCCCTCATGAGAACCACAAATCACCATCTTCATTCCTTGTATAAAGCCAATAGAAGAAATATACACTCGTTCATCATCGACCACTAAATCCTTGGCTAGGAAAAGAAAAGCTGGTGGATGCCAATGCATCAGAAAACCCACCGAGTCGGCGAATCATGGCATCATCTATAATAATAAGTTGAGGAGAATGGGGTGCATCGAAAGGAAAGGATGGAGAAGGGGACTCTGCAGTAACTTGTTGAAGATGATGGCAGTATTGAAGAAAGTGATGCATACAGGAAAGAAGCCACGAGCCAGTTTCAACTACGATCCATGGAGTTATGCGCTCAACTTTGACGATGGATGCTATGAGATTTTAGAAGATCAGGAACATGGGGAAGGAAGACGTTACAAAAAGGCGTATGCGCTTCATCCTTGTTCCTATTATTATTAGTTCGGGCTTCCTTTTACTAGTACGTACGTATGGCGTTCATCCTTGTTCCTAGTGCTTTCCAAAAGGATATTTATGCCATTTCTTAACCTTTAACGACAGATTAGCACCAGCTTTGCCTGGATTTTTATTAGCAAGGGTTTCTAAATTCTAATTATTAGCAATGTAATCCGGATCTAATCTGTTTGCTTTTTTGAACAGAGCCTGCTCTCTCGGGCCCCACCCAGCG

Network for GWHGAAEX005944

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.290
SRP064423	SRR2545915	Juvenile tuber	0.530
SRP108465	SRR5643513	five period of Gastrodia elata	0.780
	SRR5643514	five period of Gastrodia elata	2.280
	SRR5643515	five period of Gastrodia elata	1.090
	SRR5643524	five period of Gastrodia elata	2.110
	SRR5643525	five period of Gastrodia elata	1.360
	SRR5643528	five period of Gastrodia elata	0.490
	SRR5643658	five period of Gastrodia elata	1.970
	SRR5643659	five period of Gastrodia elata	1.520
	SRR5643660	five period of Gastrodia elata	1.420
	SRR5643661	five period of Gastrodia elata	1.390
	SRR5643662	five period of Gastrodia elata	2.310
	SRR5643663	five period of Gastrodia elata	1.040
	SRR5643664	five period of Gastrodia elata	1.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.780
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.950
SRP279888	Gastro	Gastrodia elata tuber	0.99
	Juven	Juvenile tuber	1.58
	Mother_Gastro	Mother tuber of Gastrodia elata	0.56
	Mother_Juven	Mother tuber of Juvenile	0.83