Detail information of GWHGAAEX005952/evm.TU.scaffold_175.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|385333682|ref|YP_005887633.1|8.00E-146fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
KOGKOG16830Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase
nrgi|743820029|ref|XP_010931678.1|0PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like [Elaeis guineensis]
Swissprottr|Q39659|MFPA_CUCSA03-hydroxyacyl-CoA dehydrogenase
trEMBLtr|M0S4B3|M0S4B3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P01720_001}
TAIRAT3G068600multifunctional protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000175131391163235+
Transcript Sequence

Network for GWHGAAEX005952

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.19ECH_11063041.30E-40
PF02737.173HCDH_N4055822.40E-59
PF00725.213HCDH5856784.10E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10527MFP2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0006631Biological Processfatty acid metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0003824Molecular Functioncatalytic activity
GO:0003857Molecular Function3-hydroxyacyl-CoA dehydrogenase activity
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms321.140
SRR2545915Juvenile tuber143.870
SRP108465SRR5643513five period of Gastrodia elata130.300
SRR5643514five period of Gastrodia elata142.050
SRR5643515five period of Gastrodia elata105.500
SRR5643524five period of Gastrodia elata121.150
SRR5643525five period of Gastrodia elata126.530
SRR5643528five period of Gastrodia elata127.330
SRR5643658five period of Gastrodia elata135.170
SRR5643659five period of Gastrodia elata84.060
SRR5643660five period of Gastrodia elata96.850
SRR5643661five period of Gastrodia elata72.890
SRR5643662five period of Gastrodia elata85.760
SRR5643663five period of Gastrodia elata98.840
SRR5643664five period of Gastrodia elata98.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1147.220
SRR6049655Rhizomagastrodiae_C368-T10_good_1158.750
SRR6049656Rhizomagastrodiae_C368-T07_good_1145.820
SRR6049657Rhizomagastrodiae_C368-T07_good_1159.180
SRR6049658Rhizomagastrodiae_C368-T04_good_1192.280
SRR6049659Rhizomagastrodiae_C368-T04_good_1211.150
SRR6049660Rhizomagastrodiae_C368-T01_good_1172.940
SRR6049661Rhizomagastrodiae_C368-T04_good_1178.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1136.240
SRR6049663Rhizomagastrodiae_C368-T01_good_1162.560
SRR6049664Rhizomagastrodiae_C368-T10_good_1166.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1166.710
SRP279888GastroGastrodia elata tuber 112.31
JuvenJuvenile tuber163.85
Mother_GastroMother tuber of Gastrodia elata 114.92
Mother_JuvenMother tuber of Juvenile 106.51