Detail information of GWHGAAEX005954/evm.TU.scaffold_175.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21760Exocyst complex, subunit SEC15
nrgi|743819981|ref|XP_010931667.1|0PREDICTED: exocyst complex component SEC15B-like [Elaeis guineensis]
Swissprottr|F4JHH5|SC15B_ARATH0Exocyst complex component SEC15B
trEMBLtr|V4VWD1|V4VWD1_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR57624.1} (Fragment)
TAIRAT4G023500exocyst complex component sec15B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000175210928213733+
Transcript Sequence

Network for GWHGAAEX005954

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04091.11Sec154427403.00E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006904Biological Processvesicle docking involved in exocytosis
GO:0000145Cellular Componentexocyst

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.240
SRR2545915Juvenile tuber14.300
SRP108465SRR5643513five period of Gastrodia elata25.370
SRR5643514five period of Gastrodia elata19.490
SRR5643515five period of Gastrodia elata21.860
SRR5643524five period of Gastrodia elata20.470
SRR5643525five period of Gastrodia elata41.240
SRR5643528five period of Gastrodia elata38.260
SRR5643658five period of Gastrodia elata42.390
SRR5643659five period of Gastrodia elata38.010
SRR5643660five period of Gastrodia elata39.050
SRR5643661five period of Gastrodia elata44.770
SRR5643662five period of Gastrodia elata50.800
SRR5643663five period of Gastrodia elata35.580
SRR5643664five period of Gastrodia elata37.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.920
SRR6049655Rhizomagastrodiae_C368-T10_good_138.860
SRR6049656Rhizomagastrodiae_C368-T07_good_122.480
SRR6049657Rhizomagastrodiae_C368-T07_good_119.540
SRR6049658Rhizomagastrodiae_C368-T04_good_117.360
SRR6049659Rhizomagastrodiae_C368-T04_good_116.440
SRR6049660Rhizomagastrodiae_C368-T01_good_119.860
SRR6049661Rhizomagastrodiae_C368-T04_good_119.330
SRR6049662Rhizomagastrodiae_C368-T01_good_122.300
SRR6049663Rhizomagastrodiae_C368-T01_good_116.900
SRR6049664Rhizomagastrodiae_C368-T10_good_121.070
SRR6049665Rhizomagastrodiae_C368-T10_good_121.070
SRP279888GastroGastrodia elata tuber 23.02
JuvenJuvenile tuber37.00
Mother_GastroMother tuber of Gastrodia elata 25.76
Mother_JuvenMother tuber of Juvenile 37.14