Detail information of GWHGAAEX005958/evm.TU.scaffold_175.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672180070|ref|XP_008810215.1|1.23E-63PREDICTED: mediator of RNA polymerase II transcription subunit 28 [Phoenix dactylifera]
Swissprottr|Q9LFA5|MED28_ARATH3.00E-49Mediator of RNA polymerase II transcription subunit 28
trEMBLtr|M0TN61|M0TN61_MUSAM3.00E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P06580_001}
TAIRAT3G528601.00E-48Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000175261019268120-
Transcript Sequence

Network for GWHGAAEX005958

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.440
SRR2545915Juvenile tuber57.500
SRP108465SRR5643513five period of Gastrodia elata51.990
SRR5643514five period of Gastrodia elata61.690
SRR5643515five period of Gastrodia elata59.180
SRR5643524five period of Gastrodia elata54.860
SRR5643525five period of Gastrodia elata75.780
SRR5643528five period of Gastrodia elata56.580
SRR5643658five period of Gastrodia elata52.000
SRR5643659five period of Gastrodia elata95.710
SRR5643660five period of Gastrodia elata100.030
SRR5643661five period of Gastrodia elata111.050
SRR5643662five period of Gastrodia elata113.000
SRR5643663five period of Gastrodia elata116.970
SRR5643664five period of Gastrodia elata138.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.170
SRR6049655Rhizomagastrodiae_C368-T10_good_190.230
SRR6049656Rhizomagastrodiae_C368-T07_good_137.440
SRR6049657Rhizomagastrodiae_C368-T07_good_145.440
SRR6049658Rhizomagastrodiae_C368-T04_good_156.110
SRR6049659Rhizomagastrodiae_C368-T04_good_153.000
SRR6049660Rhizomagastrodiae_C368-T01_good_142.750
SRR6049661Rhizomagastrodiae_C368-T04_good_143.630
SRR6049662Rhizomagastrodiae_C368-T01_good_135.940
SRR6049663Rhizomagastrodiae_C368-T01_good_145.420
SRR6049664Rhizomagastrodiae_C368-T10_good_134.090
SRR6049665Rhizomagastrodiae_C368-T10_good_134.090
SRP279888GastroGastrodia elata tuber 143.08
JuvenJuvenile tuber92.22
Mother_GastroMother tuber of Gastrodia elata 59.48
Mother_JuvenMother tuber of Juvenile 58.51