Detail information of GWHGAAEX005969/evm.TU.scaffold_175.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743819867|ref|XP_010931643.1|4.24E-88PREDICTED: stress-related protein-like [Elaeis guineensis]
Swissprottr|Q9SW70|SRP_VITRI5.00E-69Stress-related protein
trEMBLtr|S5CI59|S5CI59_PERAE6.00E-70Lipid droplet-associated protein 2 {ECO:0000313|EMBL:AGQ04594.1}
TAIRAT3G055002.00E-63Rubber elongation factor protein (REF)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000175645252646056-
Transcript Sequence

Network for GWHGAAEX005969

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05755.11REF311211.00E-35
PF05755.11REF1152161.80E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms155.320
SRR2545915Juvenile tuber256.210
SRP108465SRR5643513five period of Gastrodia elata286.860
SRR5643514five period of Gastrodia elata249.710
SRR5643515five period of Gastrodia elata314.100
SRR5643524five period of Gastrodia elata235.650
SRR5643525five period of Gastrodia elata583.940
SRR5643528five period of Gastrodia elata393.020
SRR5643658five period of Gastrodia elata351.230
SRR5643659five period of Gastrodia elata351.220
SRR5643660five period of Gastrodia elata372.290
SRR5643661five period of Gastrodia elata445.680
SRR5643662five period of Gastrodia elata403.950
SRR5643663five period of Gastrodia elata390.960
SRR5643664five period of Gastrodia elata507.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1370.550
SRR6049655Rhizomagastrodiae_C368-T10_good_1254.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1368.470
SRR6049657Rhizomagastrodiae_C368-T07_good_1332.830
SRR6049658Rhizomagastrodiae_C368-T04_good_1348.380
SRR6049659Rhizomagastrodiae_C368-T04_good_1375.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1310.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1358.540
SRR6049662Rhizomagastrodiae_C368-T01_good_1307.850
SRR6049663Rhizomagastrodiae_C368-T01_good_1349.000
SRR6049664Rhizomagastrodiae_C368-T10_good_1407.750
SRR6049665Rhizomagastrodiae_C368-T10_good_1407.750
SRP279888GastroGastrodia elata tuber 379.70
JuvenJuvenile tuber226.43
Mother_GastroMother tuber of Gastrodia elata 368.89
Mother_JuvenMother tuber of Juvenile 286.73