Detail information of GWHGAAEX005976/evm.TU.scaffold_175.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695073972|ref|XP_009384171.1|1.67E-38PREDICTED: protein RALF-like 33 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8L9P8|RLF33_ARATH1.00E-35Protein RALF-like 33 (Precursor)
trEMBLtr|M0RTB5|M0RTB5_MUSAM6.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P18350_001}
TAIRAT1G029009.00E-35rapid alkalinization factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017511159841119078+
Transcript Sequence

Network for GWHGAAEX005976

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05498.10RALF551154.10E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.550
SRR2545915Juvenile tuber19.370
SRP108465SRR5643513five period of Gastrodia elata91.030
SRR5643514five period of Gastrodia elata74.880
SRR5643515five period of Gastrodia elata85.000
SRR5643524five period of Gastrodia elata73.350
SRR5643525five period of Gastrodia elata161.900
SRR5643528five period of Gastrodia elata127.450
SRR5643658five period of Gastrodia elata177.110
SRR5643659five period of Gastrodia elata89.100
SRR5643660five period of Gastrodia elata97.240
SRR5643661five period of Gastrodia elata110.460
SRR5643662five period of Gastrodia elata104.660
SRR5643663five period of Gastrodia elata90.720
SRR5643664five period of Gastrodia elata108.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_188.760
SRR6049655Rhizomagastrodiae_C368-T10_good_152.350
SRR6049656Rhizomagastrodiae_C368-T07_good_181.980
SRR6049657Rhizomagastrodiae_C368-T07_good_169.790
SRR6049658Rhizomagastrodiae_C368-T04_good_175.570
SRR6049659Rhizomagastrodiae_C368-T04_good_177.830
SRR6049660Rhizomagastrodiae_C368-T01_good_181.610
SRR6049661Rhizomagastrodiae_C368-T04_good_181.350
SRR6049662Rhizomagastrodiae_C368-T01_good_1117.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1113.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.640
SRP279888GastroGastrodia elata tuber 82.14
JuvenJuvenile tuber40.40
Mother_GastroMother tuber of Gastrodia elata 137.90
Mother_JuvenMother tuber of Juvenile 41.23