Detail information of GWHGAAEX005982/evm.TU.scaffold_175.40
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226310994|ref|YP_002770888.1| | 7.00E-56 | dephospho-CoA kinase [Brevibacillus brevis NBRC 100599] |
| KOG | KOG3220 | 2.00E-100 | Similar to bacterial dephospho-CoA kinase |
| nr | gi|743884534|ref|XP_010909713.1| | 2.93E-116 | PREDICTED: dephospho-CoA kinase-like [Elaeis guineensis] |
| Swissprot | tr|Q94DR2|COAE_ORYSJ | 2.00E-110 | Dephospho-CoA kinase |
| trEMBL | tr|C5YLK2|C5YLK2_SORBI | 3.00E-110 | Dephospho-CoA kinase 2 |
| TAIR | AT2G27490 | 2.00E-100 | dephospho-CoA kinase family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000175 | 1294542 | 1309036 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX005982
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01121.19 | CoaE | 3 | 182 | 4.00E-60 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00859 | coaE | Metabolic pathways | map01100 |
| Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015937 | Biological Process | coenzyme A biosynthetic process |
| GO:0004140 | Molecular Function | dephospho-CoA kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 225.590 |
| SRR2545915 | Juvenile tuber | 113.730 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.010 |
| SRR5643514 | five period of Gastrodia elata | 41.370 | |
| SRR5643515 | five period of Gastrodia elata | 38.500 | |
| SRR5643524 | five period of Gastrodia elata | 32.810 | |
| SRR5643525 | five period of Gastrodia elata | 55.330 | |
| SRR5643528 | five period of Gastrodia elata | 46.950 | |
| SRR5643658 | five period of Gastrodia elata | 55.880 | |
| SRR5643659 | five period of Gastrodia elata | 26.200 | |
| SRR5643660 | five period of Gastrodia elata | 32.990 | |
| SRR5643661 | five period of Gastrodia elata | 27.660 | |
| SRR5643662 | five period of Gastrodia elata | 30.470 | |
| SRR5643663 | five period of Gastrodia elata | 32.090 | |
| SRR5643664 | five period of Gastrodia elata | 32.970 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 55.760 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 51.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 63.780 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 80.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 83.200 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 111.350 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 68.110 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 77.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 44.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 64.510 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 50.370 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 50.370 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 57.10 |
| Juven | Juvenile tuber | 59.23 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 84.70 | |
| Mother_Juven | Mother tuber of Juvenile | 59.22 |