Detail information of GWHGAAEX005991/evm.TU.scaffold_175.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|319955332|ref|YP_004166599.1|2.00E-32guanine deaminase [Cellulophaga algicola DSM 14237]
KOGKOG10187.00E-66Cytosine deaminase FCY1 and related enzymes
nrgi|743855520|ref|XP_010941464.1|3.47E-72PREDICTED: probable cytosine deaminase [Elaeis guineensis]
Swissprottr|Q9S7I0|TADA_ARATH1.00E-13tRNA(adenine(34)) deaminase, chloroplastic (Precursor)
trEMBLtr|I1H2G0|I1H2G0_BRADI3.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G53437.2}
TAIRAT5G280507.00E-66Cytidine/deoxycytidylate deaminase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017515745461585853-
Transcript Sequence

Network for GWHGAAEX005991

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00383.22dCMP_cyt_deam_1341288.60E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0003824Molecular Functioncatalytic activity
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.800
SRR2545915Juvenile tuber18.630
SRP108465SRR5643513five period of Gastrodia elata30.330
SRR5643514five period of Gastrodia elata44.820
SRR5643515five period of Gastrodia elata34.000
SRR5643524five period of Gastrodia elata47.470
SRR5643525five period of Gastrodia elata18.660
SRR5643528five period of Gastrodia elata28.000
SRR5643658five period of Gastrodia elata18.950
SRR5643659five period of Gastrodia elata17.190
SRR5643660five period of Gastrodia elata17.160
SRR5643661five period of Gastrodia elata17.530
SRR5643662five period of Gastrodia elata11.600
SRR5643663five period of Gastrodia elata14.400
SRR5643664five period of Gastrodia elata11.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.920
SRR6049655Rhizomagastrodiae_C368-T10_good_17.770
SRR6049656Rhizomagastrodiae_C368-T07_good_116.600
SRR6049657Rhizomagastrodiae_C368-T07_good_18.720
SRR6049658Rhizomagastrodiae_C368-T04_good_110.200
SRR6049659Rhizomagastrodiae_C368-T04_good_16.780
SRR6049660Rhizomagastrodiae_C368-T01_good_18.300
SRR6049661Rhizomagastrodiae_C368-T04_good_16.840
SRR6049662Rhizomagastrodiae_C368-T01_good_115.030
SRR6049663Rhizomagastrodiae_C368-T01_good_19.350
SRR6049664Rhizomagastrodiae_C368-T10_good_126.530
SRR6049665Rhizomagastrodiae_C368-T10_good_126.530
SRP279888GastroGastrodia elata tuber 11.63
JuvenJuvenile tuber17.84
Mother_GastroMother tuber of Gastrodia elata 13.57
Mother_JuvenMother tuber of Juvenile 23.07