Detail information of GWHGAAEX005993/evm.TU.scaffold_175.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31956.00E-107Uncharacterized membrane protein NPD008/CGI-148
nrgi|672116062|ref|XP_008781182.1|3.01E-117PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Phoenix dactylifera]
Swissprottr|Q8LEK2|TVP23_ARATH2.00E-107Golgi apparatus membrane protein-like protein ECHIDNA
trEMBLtr|M0S2V4|M0S2V4_MUSAM2.00E-114Golgi apparatus membrane protein TVP23 {ECO:0000256|RuleBase:RU361206}
TAIRAT1G093306.00E-107Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017517718841801537+
Transcript Sequence

Network for GWHGAAEX005993

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05832.11DUF846131522.10E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms91.770
SRR2545915Juvenile tuber93.720
SRP108465SRR5643513five period of Gastrodia elata93.980
SRR5643514five period of Gastrodia elata88.640
SRR5643515five period of Gastrodia elata91.110
SRR5643524five period of Gastrodia elata95.520
SRR5643525five period of Gastrodia elata113.710
SRR5643528five period of Gastrodia elata105.720
SRR5643658five period of Gastrodia elata108.680
SRR5643659five period of Gastrodia elata76.810
SRR5643660five period of Gastrodia elata82.100
SRR5643661five period of Gastrodia elata87.250
SRR5643662five period of Gastrodia elata75.800
SRR5643663five period of Gastrodia elata85.110
SRR5643664five period of Gastrodia elata68.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_179.790
SRR6049655Rhizomagastrodiae_C368-T10_good_155.630
SRR6049656Rhizomagastrodiae_C368-T07_good_189.670
SRR6049657Rhizomagastrodiae_C368-T07_good_169.280
SRR6049658Rhizomagastrodiae_C368-T04_good_174.260
SRR6049659Rhizomagastrodiae_C368-T04_good_169.930
SRR6049660Rhizomagastrodiae_C368-T01_good_169.390
SRR6049661Rhizomagastrodiae_C368-T04_good_173.580
SRR6049662Rhizomagastrodiae_C368-T01_good_195.240
SRR6049663Rhizomagastrodiae_C368-T01_good_189.330
SRR6049664Rhizomagastrodiae_C368-T10_good_1111.130
SRR6049665Rhizomagastrodiae_C368-T10_good_1111.130
SRP279888GastroGastrodia elata tuber 79.27
JuvenJuvenile tuber68.59
Mother_GastroMother tuber of Gastrodia elata 74.43
Mother_JuvenMother tuber of Juvenile 67.93