Detail information of GWHGAAEX005997/evm.TU.scaffold_175.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225458682|ref|XP_002284933.1|5.41E-48PREDICTED: ethylene-responsive transcription factor ERF010-like [Vitis vinifera]
Swissprottr|Q8LC30|RAP21_ARATH9.00E-40Ethylene-responsive transcription factor RAP2-1
trEMBLtr|F6H1A8|F6H1A8_VITVI2.00E-48Putative uncharacterized protein {ECO:0000313|EMBL:CCB45817.1}
TAIRAT1G467685.00E-39related to AP2 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000017520484232049637-
Transcript Sequence

Network for GWHGAAEX005997

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP215592.60E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.170
SRR2545915Juvenile tuber38.010
SRP108465SRR5643513five period of Gastrodia elata73.360
SRR5643514five period of Gastrodia elata61.170
SRR5643515five period of Gastrodia elata116.300
SRR5643524five period of Gastrodia elata56.680
SRR5643525five period of Gastrodia elata215.510
SRR5643528five period of Gastrodia elata99.480
SRR5643658five period of Gastrodia elata159.920
SRR5643659five period of Gastrodia elata140.520
SRR5643660five period of Gastrodia elata202.330
SRR5643661five period of Gastrodia elata330.200
SRR5643662five period of Gastrodia elata192.650
SRR5643663five period of Gastrodia elata185.020
SRR5643664five period of Gastrodia elata202.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.560
SRR6049655Rhizomagastrodiae_C368-T10_good_157.680
SRR6049656Rhizomagastrodiae_C368-T07_good_147.960
SRR6049657Rhizomagastrodiae_C368-T07_good_159.140
SRR6049658Rhizomagastrodiae_C368-T04_good_152.500
SRR6049659Rhizomagastrodiae_C368-T04_good_155.420
SRR6049660Rhizomagastrodiae_C368-T01_good_143.000
SRR6049661Rhizomagastrodiae_C368-T04_good_147.290
SRR6049662Rhizomagastrodiae_C368-T01_good_136.370
SRR6049663Rhizomagastrodiae_C368-T01_good_136.220
SRR6049664Rhizomagastrodiae_C368-T10_good_129.920
SRR6049665Rhizomagastrodiae_C368-T10_good_129.920
SRP279888GastroGastrodia elata tuber 129.67
JuvenJuvenile tuber23.45
Mother_GastroMother tuber of Gastrodia elata 211.17
Mother_JuvenMother tuber of Juvenile 110.91