Detail information of GWHGAAEX006000/evm.TU.scaffold_176.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672108258|ref|XP_008784223.1|4.10E-68PREDICTED: zinc-finger homeodomain protein 9-like [Phoenix dactylifera]
Swissprottr|Q9LXG0|ZHD8_ARATH3.00E-48Zinc-finger homeodomain protein 8
trEMBLtr|M0RMK3|M0RMK3_MUSAM1.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29790_001}
TAIRAT5G152109.00E-48homeobox protein 30

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000183120602121761-
Transcript Sequence

Network for GWHGAAEX006000

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.11ZF-HD_dimer29808.70E-27
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.490
SRR2545915Juvenile tuber3.770
SRP108465SRR5643513five period of Gastrodia elata4.850
SRR5643514five period of Gastrodia elata3.410
SRR5643515five period of Gastrodia elata3.340
SRR5643524five period of Gastrodia elata3.580
SRR5643525five period of Gastrodia elata3.730
SRR5643528five period of Gastrodia elata3.770
SRR5643658five period of Gastrodia elata2.440
SRR5643659five period of Gastrodia elata4.390
SRR5643660five period of Gastrodia elata1.730
SRR5643661five period of Gastrodia elata4.060
SRR5643662five period of Gastrodia elata5.590
SRR5643663five period of Gastrodia elata5.240
SRR5643664five period of Gastrodia elata4.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.160
SRR6049655Rhizomagastrodiae_C368-T10_good_12.940
SRR6049656Rhizomagastrodiae_C368-T07_good_13.580
SRR6049657Rhizomagastrodiae_C368-T07_good_12.780
SRR6049658Rhizomagastrodiae_C368-T04_good_13.880
SRR6049659Rhizomagastrodiae_C368-T04_good_12.320
SRR6049660Rhizomagastrodiae_C368-T01_good_12.050
SRR6049661Rhizomagastrodiae_C368-T04_good_12.660
SRR6049662Rhizomagastrodiae_C368-T01_good_13.990
SRR6049663Rhizomagastrodiae_C368-T01_good_13.830
SRR6049664Rhizomagastrodiae_C368-T10_good_12.810
SRR6049665Rhizomagastrodiae_C368-T10_good_12.810
SRP279888GastroGastrodia elata tuber 4.16
JuvenJuvenile tuber3.15
Mother_GastroMother tuber of Gastrodia elata 8.09
Mother_JuvenMother tuber of Juvenile 3.98