Detail information of GWHGAAEX006005/evm.TU.scaffold_176.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158336808|ref|YP_001517982.1|2.00E-50short chain dehydrogenase [Acaryochloris marina MBIC11017]
KOGKOG12097.00E-1151-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases
nrgi|743849355|ref|XP_010939605.1|7.91E-149PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Elaeis guineensis]
Swissprottr|Q9LUF2|HSD4B_ARATH4.00E-2411-beta-hydroxysteroid dehydrogenase-like 4B
trEMBLtr|M0TTD7|M0TTD7_MUSAM6.00E-140Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P24840_001}
TAIRAT5G100507.00E-115NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000183328616354818-
Transcript Sequence

Network for GWHGAAEX006005

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short71926.10E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.620
SRR2545915Juvenile tuber18.670
SRP108465SRR5643513five period of Gastrodia elata19.880
SRR5643514five period of Gastrodia elata19.290
SRR5643515five period of Gastrodia elata19.280
SRR5643524five period of Gastrodia elata15.400
SRR5643525five period of Gastrodia elata48.990
SRR5643528five period of Gastrodia elata44.160
SRR5643658five period of Gastrodia elata51.080
SRR5643659five period of Gastrodia elata23.100
SRR5643660five period of Gastrodia elata26.790
SRR5643661five period of Gastrodia elata26.050
SRR5643662five period of Gastrodia elata28.660
SRR5643663five period of Gastrodia elata25.810
SRR5643664five period of Gastrodia elata31.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.170
SRR6049655Rhizomagastrodiae_C368-T10_good_124.240
SRR6049656Rhizomagastrodiae_C368-T07_good_120.020
SRR6049657Rhizomagastrodiae_C368-T07_good_132.580
SRR6049658Rhizomagastrodiae_C368-T04_good_130.640
SRR6049659Rhizomagastrodiae_C368-T04_good_133.990
SRR6049660Rhizomagastrodiae_C368-T01_good_127.200
SRR6049661Rhizomagastrodiae_C368-T04_good_128.520
SRR6049662Rhizomagastrodiae_C368-T01_good_117.490
SRR6049663Rhizomagastrodiae_C368-T01_good_116.920
SRR6049664Rhizomagastrodiae_C368-T10_good_120.520
SRR6049665Rhizomagastrodiae_C368-T10_good_120.520
SRP279888GastroGastrodia elata tuber 38.41
JuvenJuvenile tuber22.16
Mother_GastroMother tuber of Gastrodia elata 21.57
Mother_JuvenMother tuber of Juvenile 12.59