Detail information of GWHGAAEX006019/evm.TU.scaffold_176.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|385333495|ref|YP_005887446.1|5.00E-24heat shock protein Hsp20 [Marinobacter adhaerens HP15]
KOGKOG07104.00E-62Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
nrgi|514819951|ref|XP_004984667.1|5.09E-72PREDICTED: 17.9 kDa class I heat shock protein-like [Setaria italica]
Swissprottr|Q84J50|HS177_ORYSJ6.00E-6717.7 kDa class I heat shock protein
trEMBLtr|K4AG60|K4AG60_SETIT2.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:Si037867m}
TAIRAT1G535404.00E-62HSP20-like chaperones superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018310399361040403+
Transcript Sequence

Network for GWHGAAEX006019

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.20HSP20511542.90E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms434.180
SRR2545915Juvenile tuber7291.900
SRP108465SRR5643513five period of Gastrodia elata335.430
SRR5643514five period of Gastrodia elata117.210
SRR5643515five period of Gastrodia elata380.810
SRR5643524five period of Gastrodia elata168.130
SRR5643525five period of Gastrodia elata6064.270
SRR5643528five period of Gastrodia elata7979.190
SRR5643658five period of Gastrodia elata848.590
SRR5643659five period of Gastrodia elata1404.350
SRR5643660five period of Gastrodia elata1456.740
SRR5643661five period of Gastrodia elata1480.800
SRR5643662five period of Gastrodia elata1228.090
SRR5643663five period of Gastrodia elata1479.750
SRR5643664five period of Gastrodia elata1438.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1782.680
SRR6049655Rhizomagastrodiae_C368-T10_good_136.680
SRR6049656Rhizomagastrodiae_C368-T07_good_1684.670
SRR6049657Rhizomagastrodiae_C368-T07_good_1523.750
SRR6049658Rhizomagastrodiae_C368-T04_good_1618.730
SRR6049659Rhizomagastrodiae_C368-T04_good_1637.760
SRR6049660Rhizomagastrodiae_C368-T01_good_1269.650
SRR6049661Rhizomagastrodiae_C368-T04_good_1822.110
SRR6049662Rhizomagastrodiae_C368-T01_good_1118.220
SRR6049663Rhizomagastrodiae_C368-T01_good_1138.810
SRR6049664Rhizomagastrodiae_C368-T10_good_1134.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1134.540
SRP279888GastroGastrodia elata tuber 5,760.91
JuvenJuvenile tuber1,170.60
Mother_GastroMother tuber of Gastrodia elata 1,202.96
Mother_JuvenMother tuber of Juvenile 1,663.33