Detail information of GWHGAAEX006021/evm.TU.scaffold_176.27
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|192359696|ref|YP_001981315.1| | 1.00E-85 | aldose 1-epimerase [Cellvibrio japonicus Ueda107] |
| KOG | KOG1604 | 8.00E-124 | Predicted mutarotase |
| nr | gi|743839662|ref|XP_010937062.1| | 2.12E-178 | PREDICTED: aldose 1-epimerase-like [Elaeis guineensis] |
| trEMBL | tr|M0T112|M0T112_MUSAM | 9.00E-171 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P23370_001} |
| TAIR | AT5G15140 | 8.00E-124 | Galactose mutarotase-like superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000183 | 1044502 | 1066500 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006021
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01263.19 | Aldose_epim | 32 | 350 | 6.20E-80 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0019318 | Biological Process | hexose metabolic process |
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0016853 | Molecular Function | isomerase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.930 |
| SRR2545915 | Juvenile tuber | 30.140 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 37.740 |
| SRR5643514 | five period of Gastrodia elata | 47.680 | |
| SRR5643515 | five period of Gastrodia elata | 42.490 | |
| SRR5643524 | five period of Gastrodia elata | 46.730 | |
| SRR5643525 | five period of Gastrodia elata | 74.610 | |
| SRR5643528 | five period of Gastrodia elata | 70.250 | |
| SRR5643658 | five period of Gastrodia elata | 91.000 | |
| SRR5643659 | five period of Gastrodia elata | 32.770 | |
| SRR5643660 | five period of Gastrodia elata | 38.660 | |
| SRR5643661 | five period of Gastrodia elata | 39.020 | |
| SRR5643662 | five period of Gastrodia elata | 33.100 | |
| SRR5643663 | five period of Gastrodia elata | 34.630 | |
| SRR5643664 | five period of Gastrodia elata | 37.040 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.790 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 59.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.640 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 27.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.220 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 17.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.250 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 47.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 47.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.27 |
| Juven | Juvenile tuber | 42.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 36.19 | |
| Mother_Juven | Mother tuber of Juvenile | 33.06 |