Detail information of GWHGAAEX006028/evm.TU.scaffold_176.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672175980|ref|XP_008808053.1|3.08E-60PREDICTED: AP2-like ethylene-responsive transcription factor AIL1 [Phoenix dactylifera]
Swissprottr|Q38914|ANT_ARATH7.00E-35AP2-like ethylene-responsive transcription factor ANT
trEMBLtr|K3ZJF3|K3ZJF3_SETIT2.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:Si026706m}
TAIRAT4G377502.00E-34Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018315305841531453+
Transcript Sequence

Network for GWHGAAEX006028

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP226787.80E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.100
SRR2545915Juvenile tuber13.080
SRP108465SRR5643513five period of Gastrodia elata18.520
SRR5643514five period of Gastrodia elata17.340
SRR5643515five period of Gastrodia elata24.650
SRR5643524five period of Gastrodia elata17.440
SRR5643525five period of Gastrodia elata22.970
SRR5643528five period of Gastrodia elata22.160
SRR5643658five period of Gastrodia elata22.310
SRR5643659five period of Gastrodia elata24.030
SRR5643660five period of Gastrodia elata12.220
SRR5643661five period of Gastrodia elata16.900
SRR5643662five period of Gastrodia elata14.260
SRR5643663five period of Gastrodia elata22.620
SRR5643664five period of Gastrodia elata24.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.640
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_136.790
SRR6049657Rhizomagastrodiae_C368-T07_good_131.570
SRR6049658Rhizomagastrodiae_C368-T04_good_134.860
SRR6049659Rhizomagastrodiae_C368-T04_good_136.340
SRR6049660Rhizomagastrodiae_C368-T01_good_123.140
SRR6049661Rhizomagastrodiae_C368-T04_good_123.940
SRR6049662Rhizomagastrodiae_C368-T01_good_122.760
SRR6049663Rhizomagastrodiae_C368-T01_good_137.320
SRR6049664Rhizomagastrodiae_C368-T10_good_132.290
SRR6049665Rhizomagastrodiae_C368-T10_good_132.290
SRP279888GastroGastrodia elata tuber 23.96
JuvenJuvenile tuber19.70
Mother_GastroMother tuber of Gastrodia elata 35.39
Mother_JuvenMother tuber of Juvenile 21.78