Gene detail

Detail information of GWHGAAEX006033/evm.TU.scaffold_176.50

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743783658\|ref\|XP_010921471.1\|	3.35E-10	PREDICTED: uncharacterized protein LOC105045016 [Elaeis guineensis]

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000183	1795198	1800380	+

Transcript Sequence
>GWHTAAEX006033 GGGAAGTGTTCCATTTGTAGCAGTTTTACATGTAGCTTTAAATAGCGCTCCGCGGAAGCACTGCAGGAAGTGTTCTGAAGCTTCTGTTATTTTTTCCGGAGACACCGCGCAGAGCTATAGGATGCCCGGAGCGAAAGGCGTTTGCCTCGAAGATTATGTGCGTTTCTTCAATAAGGAGGAGCAAATTATCACTTGGTTTCAGCTCAGAAAGATCTTGCGCATCAACGGGTTCGTCGAACGACGACCGTGTTTACCTAAGGTCCGTCTCCCCGCTAAGATTTACCGCTCAATTTTTCATAATTGATCCTTCACTTTCTCTGAATCACCGCTTTCAGTCGAGCGTTGAGGTTGCTTTGCGCTCGGTCGATCTGATGCCGCCTGGCAGATCTACGGTTGGAGAATGCTTGGGGAAATCTTCCGCCTTCGCGAATCTGTCGCTGGCAGAGGTAAAAAACTACGTCGACTTGCTCGGGTGGCAGGAATGCCCGATCGCATCCATCCTGACCGTTGGAAATGAATCAACAGTTGATGATGCCGGGCCAAGCTCTTCCTCTTTGAGCACCAACCCTTCTTTGAAGAGAGGGAGGAAATCGAAGGATTCTAAGACACAAAAGCGAAGGTTGGAATATGTTGCGGCAGTCATGGATAGGGACGGCGGAGGGGGCAGCCTGCAGTAATGAAACAGGCAATAGGTCTTCTTCTCAGCTGTTTTTATTACTGATTCTTATCATTCTCCTTTTATCCTTTGGCTTTTCCATAAGTGATACTATCAATATTTCTGGAATCACTGATAAATGATTATTTGTTACTCTTTTTTTTTTTTCTGTCTACACCGATCTAATCCAGTTAGATTAATTTTCCAAATTTGTAAGAAAATGAGTTGTGTTGAGTTCAGATCATCTGCATTGAATGCCTCACTCATCTTTGTATATTTATATATGCAATTTGGAAATATTATACAATAAATTAAACATAATTAAGCTGGTTATTAGGTTCAATTCAACTTCTAAACCTACCCAAATATTAGGTACTTTGGTGCCTACCGATTTACCAGCCCAAAAGTTACTTTAAACAGAAATAGAAAAACATTATGATTATATAGTTACATTTTTAACATTTACAATTTTAGTCTCTTATCCTCTTGTTCATACACTATTCCAATATTTACATAGTATAGAGTTCAGATTAGAGCGCACCATAAGATAAAGTCACATTACATGATGTGACCTTTTTGTTTTGTAATGTGCTCAATTTATAGAGTTCAGATTAAGCAATGGACAGCCTTTATGTGGAGGTAAAGGCAATGTTTTGTAGACATATCTTGTAGTCTCTAAGATAAATCTTTGGGAAGTTTATGAAGTTTAGCAATGCTACTATATATATAATCAGAATATCCATAGCTCATATTCTAACTGCTCTGTTAGTTGAATTAAGATTGATCCCACAAGTAAAGAATTTTGTCGATTGGTGCAGATCAAGCACACTACTAAGAGATGGGCTTCAATAGCACATGCCAATATATTTGGAAGTTCATCTAGATCTTCTCTATAAATGCATGTTACTGTACTAGCTCGTGAAGTTGAATTAAAATTCACATGAGTTGAAGAAGAGTCGTCATTTCGAAAGTGAGGGTTTTTCAGGATAAACTTTTTTTTCTTAATTTAAGTCTATGTATGGTTTATTTATTAAGAGATTTTGGCTCATGCCATTCGCACAAGCCATTGTTGATGCCCTGCAAAAAATTCCTAAATCCTCTCTTCTACAATTTTAGCTTTTTTGGGTCAAGATTCTGTTCATACGTTGTCTTCTTTTCCATGGAAGTATCTACGACTATTCCTTAAAAAAAAATTTCATCCGTGATTTAGGCGTGGAAAAGAGTAGCTCGATCTTGACTCTTATTTCCGACTACGTCGACAATCCAATGCCTACCATCGGTGAGAATCTCACCACTTTATTATGTTTTTTTTAGTTAATGGTGTCGCTTGCTTAAGAAACAAACAATATTGTTGATAATTGCTATTGAGTTTGATATTATTGTTGTGATGGTATGAATTCAATTTTTTCTTGTTATAACAATCCAATATTTGTGCTGTGATATATCTGTGTTTTGGCTTTGTGTTGTGTCTGGGAAGGAATAGTCTATTGATATATTGATGATCCCATGAGCAAATTTTCTGATATTTCTATTGACTTGCAGAATTGCAAGATAAGAAATGAGGACGAAGAAATTTAACAATAAGCTATTTTGCCCGCCTACTTGTTTGAAAAGAAATTAAACAATTTTTTTCCCTTTATAGTTTGATTGAGCAGGAATCATGTTTTGCTTCTTGTGACTAGAGATAGATGCGCGGTGGGGACACATTTAATTTCATTTTTTATATTGCAGTTTGATTGTGCCCAATTGAATTTTTTTTCTGGCTCCGCCTTTGGAGACTCAAATAATCTCTTATATCAAGTGAACATTATGTATACAATTAATGTTTACTATCTGAAATTTAATAGGTAGTGATTCCACCACTTAGTTGACTTCAAAAGTTTTGTTCCAATTTAGAATAATGCTGGCAAAACACAAGAACACAATATTATCTACACATATCTAACATTAAAACTTTGCTTTGTTTAAGCATAAGACTCAACCACTCATAAAAAATTCTATCCATCTTTAATAACAAGGAATGATACGAGTAATTCAAAGGAAAATGTTTGTTACTGATTCATAACTGCTGTTAAAATCATATGATGGCCTCAGCTGCGAAGTTCTGCTTTCAAAATGATTAGCTGATTTGGAGCACTGTTAGCATAAAGTAAAATTTTGCTTTCTGTTGTGCAACTATGTATTTTAGAGCAATGATAGCATAAACTATCCGATTAAAGCTTAGTTGGGACTGATCCGAAGCAGTTACAATGGAGCCTTTCTATATTGATCTTAATTCCGTTTCCATTTTATTGTTTTAATAGAAACTGCAGTTCAATTTTTACTATAGAAGAATATGTAATATCAAGCAAAAAATTGAATCAAATTTTTTAATGTGTTGTGCAAGTAACTATCAATCGGAAAAATTTAAGATTTTCTTAGAGTAGTTTTGCCTGTTATTCTTGGGGTATATTTTGAATGAAATTATGGTTTTCTTATGAATTGTTATTTTTGAAGTTGTGTTATTTATTTTTTAGTGTAATTTGAGCTTAGTGGATGAATTGGGTATTCATGTTTATTTTATTAAGAATGTTTTGAAACTTATTAAACGTAAGACCGCTCGATGTTCTTGTTAAAAACACTGAGCTTATTAATGGGCTTTTATGTGCCCATAGTCCTTGAGCGTTGGCTCCACGCAGGTCCGGAGCATTGACTTGAACCGAAAGCTGGGCTTTTATGTGCTCCCAGGCATCAACAGTACAGCCGAGGGAGCGTTGCGTGTTTAGGCGCGGCCAAGTGTCGGTAATTTGCTGGAATAACGGAGCTAGGACATAGGTTTGAGCCCAAGCACTCTGTGTATTTTCAAATAGTTGGAAGATCCCGAGAGCACGGTGTGAGAGCACAACGCCGGAGCAAGCCTAGGCATCGATACTTGAAGCAGTCACCCGATAACCCAACACTAGGGCGCGCTTAGACGCCAACGCCTGGAACTGTAAACCAAGGTCTCGGCGCCTAAGCGCACCCAAGCGCGGGTCGGCGAAAGCAAAACAAATGTGAGATGCAATTGCTGAGGATTTGCACAGGTGGCATGACCAGGCTGTGCATGCGGGACACATGGATGAAATCCAAGGGCTCTAGGGATAGGTGGAGGTATATGGTGGAGGTAGATGGGAGCTATTTGGAAGGTATTTGTGCCTAGGAGTTGAACTTAAGATGCTTTGTCTTCAGCTGGAGGCTTAGGCTGAGGCTAAAGCTTGGGCTTGGAGGCAGCTGGTGCTGGAGTGCGGAGCGGGGTGGACTGAAAGCCAGAGGCAGTTGCACGATGACTGCCTGAATACTACGCCAGGATGCTGGTGTGAGGTGGATGTGGAGGCTGCTATTTTAGCCGAGCGCTAGAGCTGCAGAGGTGGTTGACACTGCTGTAGGGTGACTGGAGGAGCTGCAGAGCGGAGGCGCTAGGGATGTCGTGGGGCAGTTGCACGGTGGCTACATGGATGCTGCAGAAGCTTTTGGAAGCCGTTCCAAGCAATGGAAACTGCATACCTTGACTAGGCAGTGCAGCCATGGTGATGGCTGCGGGCGGCCATAGGGCGGTGGCAGGGGGCGTCGATATGGTGGCATGCATCGTTGCAACATGGGAGGCTGTGATTTTGCCACGGATGTATGGCAACCTGAAAAGCTTGTATGATTTCTTCAGTGAATTTCTTCGTTGGTGTGGTATTGTGATTTTTCTCGATTTTTTAATTTTTCATGTGAATTTTTTTGTTTGTGTTTTTATGATTATGTGATTTATGCAGCTGTACCAGTCGCTCTGGTTGATTTTTGAAGTTCAGAGGATGGGGAACTGTTTCTTACGTTTAGCTTATTCTCACCCATAGAATTTACTTTTGCCAGAGAAGATGTAGAAGCGATTATGATTTCAGGCTATTTAAGGAATGGTTAGTGCTCAAGCATTCGAACTATGTATTGTAATATCATTATATTTAAAAAGCTATCATTAAACACAATTCTATGCCGTAATTAGTATTGCAAATGCTGGGCTAATAAATTGTTGTATATTCCCTCATTCGAATTTGTGGAGGGCTACTTGAATGAGACCATCCATGCTCGTCGACCAATGATTAAGAGCAAATGGAAGGCTATGCACATCTAGTTCATCTTGGATAATAGTGTTCTTGGATCATGTAATTTAAGATTATTTTCTAATTTGAAAAACATTATTTTGAAAATTATTGCTCATCTATGTACAAACATTTTGGTATTTTAGAAGTTTACCCTTTATTTCATGAGTTTCAATTCAACATAGTCTAAATATAATATTTTAAGAGTAAACACCATTATAATGTTT

Network for GWHGAAEX006033

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.990
SRP064423	SRR2545915	Juvenile tuber	5.880
SRP108465	SRR5643513	five period of Gastrodia elata	10.280
	SRR5643514	five period of Gastrodia elata	11.290
	SRR5643515	five period of Gastrodia elata	14.010
	SRR5643524	five period of Gastrodia elata	13.490
	SRR5643525	five period of Gastrodia elata	10.990
	SRR5643528	five period of Gastrodia elata	11.530
	SRR5643658	five period of Gastrodia elata	13.040
	SRR5643659	five period of Gastrodia elata	11.180
	SRR5643660	five period of Gastrodia elata	10.420
	SRR5643661	five period of Gastrodia elata	12.150
	SRR5643662	five period of Gastrodia elata	13.640
	SRR5643663	five period of Gastrodia elata	12.270
	SRR5643664	five period of Gastrodia elata	10.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.490
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.480
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.450
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.550
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.500
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.500
SRP279888	Gastro	Gastrodia elata tuber	13.37
	Juven	Juvenile tuber	9.24
	Mother_Gastro	Mother tuber of Gastrodia elata	16.55
	Mother_Juven	Mother tuber of Juvenile	14.70