Detail information of GWHGAAEX006034/evm.TU.scaffold_176.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|166364688|ref|YP_001656961.1|1.00E-1323-oxoacyl-ACP synthase [Microcystis aeruginosa NIES-843]
nrgi|743849003|ref|XP_010939510.1|0PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic-like [Elaeis guineensis]
Swissprottr|P49244|FABH1_CUPWR3.00E-1763-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic (Precursor)
trEMBLtr|M0T0M8|M0T0M8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P22030_001}
TAIRAT1G626402.00E-1753-ketoacyl-acyl carrier protein synthase III

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000018318957481913165+
Transcript Sequence

Network for GWHGAAEX006034

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08545.9ACP_syn_III1772562.40E-29
PF08541.9ACP_syn_III_C3164052.00E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00648fabH Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0004315Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.550
SRR2545915Juvenile tuber10.150
SRP108465SRR5643513five period of Gastrodia elata13.570
SRR5643514five period of Gastrodia elata18.600
SRR5643515five period of Gastrodia elata17.580
SRR5643524five period of Gastrodia elata17.300
SRR5643525five period of Gastrodia elata11.690
SRR5643528five period of Gastrodia elata20.890
SRR5643658five period of Gastrodia elata13.330
SRR5643659five period of Gastrodia elata17.480
SRR5643660five period of Gastrodia elata16.420
SRR5643661five period of Gastrodia elata15.590
SRR5643662five period of Gastrodia elata24.300
SRR5643663five period of Gastrodia elata20.970
SRR5643664five period of Gastrodia elata18.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.660
SRR6049655Rhizomagastrodiae_C368-T10_good_112.080
SRR6049656Rhizomagastrodiae_C368-T07_good_117.510
SRR6049657Rhizomagastrodiae_C368-T07_good_112.130
SRR6049658Rhizomagastrodiae_C368-T04_good_113.250
SRR6049659Rhizomagastrodiae_C368-T04_good_19.070
SRR6049660Rhizomagastrodiae_C368-T01_good_112.000
SRR6049661Rhizomagastrodiae_C368-T04_good_113.400
SRR6049662Rhizomagastrodiae_C368-T01_good_122.240
SRR6049663Rhizomagastrodiae_C368-T01_good_116.430
SRR6049664Rhizomagastrodiae_C368-T10_good_118.470
SRR6049665Rhizomagastrodiae_C368-T10_good_118.470
SRP279888GastroGastrodia elata tuber 21.60
JuvenJuvenile tuber14.40
Mother_GastroMother tuber of Gastrodia elata 39.04
Mother_JuvenMother tuber of Juvenile 26.93