Gene detail

Detail information of GWHGAAEX006048/evm.TU.scaffold_177.16

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|410865562\|ref\|YP_006980173.1\|	4.00E-15	serine/threonine protein kinase [Propionibacterium acidipropionici ATCC 4875]
KOG	KOG0667	0	Dual-specificity tyrosine-phosphorylation regulated kinase
nr	gi\|743860333\|ref\|XP_010942984.1\|	0	PREDICTED: uncharacterized protein LOC105060834 isoform X1 [Elaeis guineensis]
Swissprot	tr\|P51568\|AFC3_ARATH	2.00E-50	Serine/threonine-protein kinase AFC3
trEMBL	tr\|M0TQF3\|M0TQF3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P14500_001}
TAIR	AT5G35980	0	yeast YAK1-related gene 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000185	286809	356682	+

Transcript Sequence
>GWHTAAEX006048 GTGCATGGAAGCCGCGGTTCTCCCGTCGAGTGCCAAGTGTCTGATGGTCAAAAACTATGGTCAACTGAATCGGTACGTGAAGGAAGTGTGCACTGGTTAACAATGGTTTAACCGAGCTATATTCGCTAAAATCGTCGAACAGGAGGAAAGAGAAGCAAACGGAGGTGGGGAAGGAAACAGGACCGCGTGGGATTTCTCTACGACAAGTCCTTCAAATCCGTCTCGGTTTAGCTCTTCGTCAGGAATTCTTCATACTTTCTTAAGGAATTGAACCCTAGTTCTGTATCTGTCGTATTGTGATCCCAACGCCCCTTCCCGGAGGCTTTTGTTTACATTGGATTAGCCGATTTGAGGCATTGCAGCCTTAGAGTCACTGCCGAGATTCTGCGCGGAGCAGCTATGAGTCCATTATCTCTCAAAGGATCTTTAACATGGGATTGAAATCTTCAGGTGGGATTCCGAGCGCTTATCGAACGGGAGCTGAGATTCACGTTTGCGGTGGATTGGGGGATTGATACGATTAGTGAAAAGTCGTCGCTTTCGTATTCGATCCTTTTCTTTTGCGGCAATCGGATGATGGGGATGCACTGATTGTGCCGTGGGGAATCATGGAGGAGGATGGGGGTAGCAAGGAGGATGGATCCGGTGTTGTACAGACGGGAGGGGCGTACGATTCCGATTCTTCGTCCGCGTGGACGCCTCTTATCGGTGCCTTCCGTCCATATGATGTATCCCATATTTATTCCACGTCCTCTTTTAGTATGCCGGGCGGTCTTGGGGCTATCGTCAGGAGGCCCTTTGTGGCAAGACTAACTAAAGAAATAACAGAAACATTCCAATTATGTAATTCAGAGTTTAGATTTTCAGAAACACTAAACCCTAAACGTTTCCTTACCAATCCATCGGCTGGGGTATTGAATGATGGTTTTGATAACGAGGACAATGATCTAATTTTGTACGTGAACTCCATTTTGGTAAATGCTGTGTCAAAACAAAGGTACATTGTTAAAGATCTTCTTGGTCAGGGTACATTTGGACAAGTTGCAAAGTGTTGGGTTTCTGAAACCGATAATTACGTCGCTGTTAAGATTATTAAAAACCAACCTGCTTATTATCAGCAGGCGCTTGTTGAAGTGTCAATTTTATCAATGCTTAATCAGAAGTTTAATACAGATGAATGCCGTCACATTGTTCGCATTCTTGATTATTTTGTTTATCAACGTCACCTATGTATATCTTTTGAGTTGCTTGGCGCAAACTTGTATGAGTTAATAAAAATGAGCCAATTTAGAGGATTTCCGCTGAACATTGTTAGGCGATTCTCTACACAGATCCTGCATGCGCTAGTAGTCATAAAGGATGCTGGCATTATACATTGTGATCTTAAGCCAGAAAATATATTAATGACATCCAGTGCTGGGCCGGATATAAAAATTATTGATTTTGGGTCCGCTTGCTTGGAGGGACGAACTGTTTACTCGTATATTCAGAGCCGATACTATAGATCCCCAGAGGTTCTTTTAGGCTATCCATATACTGCTGCAATTGATATGTGGTCGTTCGGATGCATAGTGGCAGAGTTATTTTTGGGATTGCCTTTATTTGCTGGAGCATCAGAGTTTGATCTTCTCCATCGGATGATAGAGATTCTTGGTGAACAACCGCCTGATGATCTGCTGAGAGATGCACAAAACACAAATAAGTTTTTTAAACATGTTGGTAGTATTTATCGCTTGGAGGATGAAGAAGTTTTCAAAGGTGTTGTTCGTACTTATAGAGTTTTAAATGCGGAGGAATATGAAGCCAGGGACTGCAAAAAACCCTTGATAGGTAAGCGGTATTTCAATTATGTAAAGCTTGAAGATGTAATTGCTAAATATCCCTATAGAAAGAATTTACCTGAAGAAGAAATTACTAAAGAAACCTTAGATCGCTTGAAACTGGTTGATTTCTTAAAAGGTCTGGTTGAATTTGATCCAGCAAAACGATGGTCACCTTTGCAGGCTTCAAGGCATCCATTTATTACTGGTGAAGCCCTTACATGCCCATATATTCCTCCATCAGAGACTCAACAAATTCGTACTGTTCAAACTGTTACGGTGGACCATCACAATCCAGGTGGAGGTCATTGGTTAGCTGGTGGTCTTTCTCCACAGGTTCAAAATGTGAACAGATGTTTCCCACAGAACAGTCCTCAATTTCAGATGGTGTCTTTATCCCACGGTGGTAGTTATGGTAGCGTGGGAAGTCATGGAAGCTACATGGACAATTTTGGTATTGGAAGTAGCTATGGAAGCTATGGAGATACTAATCATATGCAGACATATTTCTCACCTGTTGGTCCATATGGTATGAATGTTCAAGCACAAGTTGGAGTATCCTTCTTAGGTACAAGCCCGGATACTCGGCGTAGACCTCAGAAGTCTCATGGAAATTTATTCGGCGTTTCTCCTACTGGAAATCTGGGACCAATGTCTCTTGGAGCCAGTCCTTCCCAATTTACACCGCCGTCTTCACAAATGCAGATTACAAATGTGTCTCCTGGGAAGTATGGGCCTTCATCTCCCGCACGAGGCAGCCTTCATGGTTCTCCCTTGGGCAAAGCTGCTGCAGTTGCCCAATATAATCGGAGAAGGGCATGGGGAAACCATGGGAGTTCAACTGTGCAGTCTCATGAAAGCTCAGCGCAGCATTGGCAAGGTTATCATAATGAGGGAATCGTTAATAGCCAGCCTGATACTTCTCATGCACAGTTCTCTTCTTCCCGTGGTTCATATCCATCTTCTAATCACTCTTACTGGAGACAACATATGAGTAGTAGTAGGGGATCAGGGCCACCTATAAACAATCATCTTGCCCATCCTATTCATAGCGCACTCAACTCAAATGCACCTGCATCAGTTTCCTCAGTGACTTTAGGTGATAAACATGAAAGTAGTTCATTACTACCTGATCCTGCAGATTGGGATCCCAATTATAGTGATGAGCTTCTTTTGCAAGAAGATAATTGTGATGTCAGCTCATTAACTTTGGGAATTTCTAATGGAATGCGGTTCGGTAATGCAATGGATTCTGCAACTTTAACTAGTGGAGTAGTCAGGTTTGGTCACATTGCTAATCAAGCATCTACAAGTTCTGGTTCAAGATTATCAAATCAAAGAACAGATGGGCAGTTTCAGGCATTCTCATCTGATGAGGGCAGCCTGTATCAGGCAAATGATATGCACACTGGTTTTAGTCGTCTGCCCAATGTGGCACAAAACTCTCCCAGCCGTTTTAGTCTGCATTCACAGCAATTGGTTAATCGGTATAGTAATCAAATGCAACCAACTTCAGCCCATGGATTAAGGGCACATCATAAAGGCCCGCCTTCCCGTTCCAATTATAATATGATCGATTCGCATTCGGCTATGTTCAACAGCAGTATGCACTGGGGGCAAAGAGCTGCTGGACATCCCATTACAACGACATTCCTTCCGGCTTCGCATGCGAGGAAGGACTATGGCAGCATCTCATAATGCATTAGAATTTTATTTTTATTTATTTTTAATGTTGCTTTTTATTTATTTTTATTTTTTGTTGGAAGGATGCTAGGATTCATGCCTGGCATTGAAAAATATGTTGTACTGCAAAATCCCATTGCTTGCTTATAGTTAATTGGCATCCCTCGCGGTCCCAATCTGTAGCTTGTCATTTGTGCTCTCTCTCTCTCTCTCTC

Network for GWHGAAEX006048

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	132	472	1.80E-48

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_DYRK-YAK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.930
SRP064423	SRR2545915	Juvenile tuber	37.550
SRP108465	SRR5643513	five period of Gastrodia elata	36.510
	SRR5643514	five period of Gastrodia elata	35.630
	SRR5643515	five period of Gastrodia elata	34.880
	SRR5643524	five period of Gastrodia elata	37.370
	SRR5643525	five period of Gastrodia elata	37.340
	SRR5643528	five period of Gastrodia elata	35.310
	SRR5643658	five period of Gastrodia elata	42.440
	SRR5643659	five period of Gastrodia elata	34.170
	SRR5643660	five period of Gastrodia elata	36.050
	SRR5643661	five period of Gastrodia elata	33.080
	SRR5643662	five period of Gastrodia elata	35.160
	SRR5643663	five period of Gastrodia elata	35.740
	SRR5643664	five period of Gastrodia elata	38.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	42.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	34.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	51.950
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	48.710
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	58.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	46.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	48.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	35.540
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	39.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.280
SRP279888	Gastro	Gastrodia elata tuber	46.02
	Juven	Juvenile tuber	64.83
	Mother_Gastro	Mother tuber of Gastrodia elata	55.47
	Mother_Juven	Mother tuber of Juvenile	84.36