Detail information of GWHGAAEX006052/evm.TU.scaffold_177.20
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434390866|ref|YP_007125813.1| | 6.00E-08 | serine/threonine protein kinase [Gloeocapsa sp. PCC 7428] |
| KOG | KOG1187 | 5.00E-56 | Serine/threonine protein kinase |
| nr | gi|743825503|ref|XP_010933044.1| | 7.95E-65 | PREDICTED: serine/threonine-protein kinase At5g01020 [Elaeis guineensis] |
| Swissprot | tr|Q8GXZ3|Y5102_ARATH | 1.00E-50 | Serine/threonine-protein kinase At5g01020 |
| trEMBL | tr|A5AHL4|A5AHL4_VITVI | 3.00E-62 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN69043.1} |
| TAIR | AT1G61590 | 5.00E-56 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000185 | 434946 | 435413 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006052
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 11 | 120 | 1.60E-12 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.160 |
| SRR2545915 | Juvenile tuber | 2.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.950 |
| SRR5643514 | five period of Gastrodia elata | 29.140 | |
| SRR5643515 | five period of Gastrodia elata | 5.830 | |
| SRR5643524 | five period of Gastrodia elata | 17.710 | |
| SRR5643525 | five period of Gastrodia elata | 5.780 | |
| SRR5643528 | five period of Gastrodia elata | 1.750 | |
| SRR5643658 | five period of Gastrodia elata | 3.740 | |
| SRR5643659 | five period of Gastrodia elata | 7.090 | |
| SRR5643660 | five period of Gastrodia elata | 11.670 | |
| SRR5643661 | five period of Gastrodia elata | 9.970 | |
| SRR5643662 | five period of Gastrodia elata | 4.670 | |
| SRR5643663 | five period of Gastrodia elata | 6.960 | |
| SRR5643664 | five period of Gastrodia elata | 7.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.770 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 71.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 19.170 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.460 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.080 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.660 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.140 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 46.270 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 46.270 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.17 |
| Juven | Juvenile tuber | 19.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.80 | |
| Mother_Juven | Mother tuber of Juvenile | 13.15 |