Detail information of GWHGAAEX006062/evm.TU.scaffold_177.30
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|326404491|ref|YP_004284573.1| | 3.00E-27 | putative serine/threonine protein kinase [Acidiphilium multivorum AIU301] |
| KOG | KOG0661 | 2.00E-165 | MAPK related serine/threonine protein kinase |
| nr | gi|695071137|ref|XP_009382627.1| | 0 | PREDICTED: cyclin-dependent kinase F-4 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q6Z8C8|CDKF4_ORYSJ | 0 | Cyclin-dependent kinase F-4 |
| trEMBL | tr|M0RPW8|M0RPW8_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P06380_001} |
| TAIR | AT5G45430 | 2.00E-165 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000185 | 606820 | 611482 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX006062
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 4 | 283 | 7.40E-75 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_RCK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 41.120 |
| SRR2545915 | Juvenile tuber | 36.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 43.710 |
| SRR5643514 | five period of Gastrodia elata | 42.310 | |
| SRR5643515 | five period of Gastrodia elata | 43.020 | |
| SRR5643524 | five period of Gastrodia elata | 41.400 | |
| SRR5643525 | five period of Gastrodia elata | 77.070 | |
| SRR5643528 | five period of Gastrodia elata | 75.070 | |
| SRR5643658 | five period of Gastrodia elata | 91.500 | |
| SRR5643659 | five period of Gastrodia elata | 39.810 | |
| SRR5643660 | five period of Gastrodia elata | 37.800 | |
| SRR5643661 | five period of Gastrodia elata | 36.640 | |
| SRR5643662 | five period of Gastrodia elata | 39.350 | |
| SRR5643663 | five period of Gastrodia elata | 40.370 | |
| SRR5643664 | five period of Gastrodia elata | 39.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 44.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 45.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 42.390 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 56.120 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 51.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 50.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 46.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 48.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 55.350 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 51.80 |
| Juven | Juvenile tuber | 44.46 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 63.54 | |
| Mother_Juven | Mother tuber of Juvenile | 58.89 |