Gene detail

Detail information of GWHGAAEX006065/evm.TU.scaffold_177.33

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|330469195\|ref\|YP_004406938.1\|	7.00E-06	methyltransferase [Verrucosispora maris AB-18-032]
nr	gi\|743775397\|ref\|XP_010918079.1\|	0	PREDICTED: probable methyltransferase PMT21 [Elaeis guineensis]
Swissprot	tr\|Q94II3\|PMTL_ARATH	0	Probable methyltransferase PMT21
trEMBL	tr\|M0SZI0\|M0SZI0_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P18010_001}
TAIR	AT1G31850	0	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000185	640881	651866	-

Transcript Sequence
>GWHTAAEX006065 GCCTATAAAATGGGATTCCTTCCCTTCGCTTCCACTCCGACATTCAGCAGATAAGAGAAAGAGGGATGAATAGATGAGCAACTTCACCGACAAAAGGAGGCTTTAAATGCAAGCATGGGATTATAAATCGTTGTTCTGACACATTTGGTTCGATCTATTCCAATTTGTATTCAACTCGATCTTCGAGAAAAGGAAGCTCTTGTCTTTATTTTTTCTGTCAGATGTTTTTGTTGGTGAAGTTGAGATTCTAAAGCATCCTTTTTGGTTCTTTTTTGCTAGGATTGAGAACATATAAAGGATGAAAAATAACGAAGCAAAACAATGGAATTTTCGTGATAAAACGGCTAGAACTGTTCCTATTGCTGCATTGTTTATATTGTCATGCGGATTTTCATTCTTTCTTGGTGGTATTTTTTACTCCGGGAAAAATAGCTTCTTCTCTAAGGTTTCAATACCGACAACAGTTTCTCAGAAAGATACTGCTGTGGCTCCTCTTATAACCAAGTTTATTACTTTCCCTGATTGTGGATCTGACTTTCAAGACTACACGCCATGCACAGATCCAAAGAGATGGCGAAGGTATGGCAATTACAGGCTTAGTTTCATGGAGCGTCATTGCCCACCAATGAGTGAAAGGAAAGAGTGCTTAGTGCCTCCGCCAGAAGGCTACAAAATTCCATTCAGATGGCCACAAAGTAAAGACAAGTGTTGGTATAGAAATGTGCCCTTCGAGTGGATAAATAATCAAAAGTCAAATCAACACTGGCTAAAAAAAGATAGGGACAAGTTTCTTTTTCCTGGTGGAGGTACTATGTTTCCTAATGGGGTTAGTAAGTATGTTGATTTGATGGAGACTCTAATTCCTGAAATGAAAGATGGGACGGTTCGTACTGCCATTGATACTGGATGTGGGGTTGCAAGCTGGGGTGGTGATCTTTTGGACCGAGGAATTTTGACTCTTTCACTTGCTCCTAGAGATAATCATGAAGCTCAAGTGCAATTTGCCCTTGAGCGAGGCATTCCTGCTATTTTAGGGATCATATCCACACAACGTCTTTCTTTTCCATCCAATTCTTTTGATATTGCTCACTGTTCCAGATGTCTCATCCCATGGACTGAATTTGGTGGGCTTTATCTTTTAGAAATACACAGAATTCTTAGACCGGGTGGATTCTGGGTCCTTTCTGGACCGCCAATTAATTATGAGAACCGATGGCGTGGTTGGAACACGACAATAGATGAGCAAAAGTCAAATTTTGACAGATTACAGAAGCTGTTAACAAGCATGTGCTTCACTTTATATAGCATGAAGGGTGATATTGCAGTGTGGCAGAAATCCGCAGATTATGGCTGTTATGAGAAATTAATGCCTACTTCCTATCCCCCTAAATGTGATGATAGCAGGGATCCAGATTCAGCATGGTATACTCCACTTCGACCATGCATAACTATACCTAGCCAGAATTTAAAGAAAGTGAAGCTGAAAGCTACTCCAAAATGGCCTGTCCGTTTAAACGAAGCTCCTGAACGTGTTTCCATGGTCCCAGGCGGAAACCTTAATGTATTCAAGAATGATCTATCCCAATGGAAGTCTAGGGTGAAGCACTACCACAAATTACTTCCAGCTCTTGGAAGCAATAAGATTAGAAATGTTATGGATATGAATACACTTTTTGGGGGTTTTGCGGCAGCGCTCATCGATTCACCTTTGTGGGTGATGAATGTCGTGTCTTCGTACGGTGCAAATTCTCTTGGTGTCATCTATGACAGGGGACTGATTGGTACCTATCATGACTGGTGTGAGCCATTCTCAACATACCCTCGAACATATGACCTCTTGCATCTTGATGGCTTATTTACTGCAGAAAGCCATAGATGCGAATTGAAGCATGTTCTTCTTGAGATGGATCGGATTCTTCGTCCAAGTGGCTATGCAATCATCCGTGAATCGGACTACTTCATAGATTCTGTATCTCTTATCGCTGAAGGAATTAAATGGAATTGCGAGAGAAGGGATGACGGAAATGAGAAACTTTTGATTTGCAAGAAAAAACTTTGGTACTCGCAGCTGAACCAAAACTGAGGTGCAGGTTTCTTCAGTCTCTGCGTTCTCTGATATATACTATATAGCAGGCAGCAGCAGTTCTCTTGCTGCATCTATACATAATCTTTGCAAATTATTCTTTGCCATTGACCATAATGAACAAAAGAACCATACGAATTGTATAATGTATAATATTTTGGATAAAACTAGTTGCAGATGTGGCTGAATCAGTGAATAAAGTGAGATTTTTTCTATAATTTATAATGTCAAACGCATGCACATTGCTTC

Network for GWHGAAEX006065

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03141.15	Methyltransf_29	82	583	3.80E-209

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	68.530
SRP064423	SRR2545915	Juvenile tuber	72.300
SRP108465	SRR5643513	five period of Gastrodia elata	50.680
	SRR5643514	five period of Gastrodia elata	45.270
	SRR5643515	five period of Gastrodia elata	44.510
	SRR5643524	five period of Gastrodia elata	50.130
	SRR5643525	five period of Gastrodia elata	95.840
	SRR5643528	five period of Gastrodia elata	98.570
	SRR5643658	five period of Gastrodia elata	116.810
	SRR5643659	five period of Gastrodia elata	37.040
	SRR5643660	five period of Gastrodia elata	39.400
	SRR5643661	five period of Gastrodia elata	38.030
	SRR5643662	five period of Gastrodia elata	40.270
	SRR5643663	five period of Gastrodia elata	45.920
	SRR5643664	five period of Gastrodia elata	39.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	54.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	43.300
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	64.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	56.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	61.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	70.490
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	62.890
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	63.680
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	66.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	62.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.200
SRP279888	Gastro	Gastrodia elata tuber	52.51
	Juven	Juvenile tuber	43.17
	Mother_Gastro	Mother tuber of Gastrodia elata	43.11
	Mother_Juven	Mother tuber of Juvenile	27.63