Detail information of GWHGAAEX006067/evm.TU.scaffold_177.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297567263|ref|YP_003686235.1|3.00E-37adenylate kinase [Meiothermus silvanus DSM 9946]
KOGKOG30791.00E-80Uridylate kinase/adenylate kinase
nrgi|743777252|ref|XP_010919050.1|8.81E-108PREDICTED: UMP-CMP kinase [Elaeis guineensis]
Swissprottr|O24464|KCY_PRUAR5.00E-93UMP-CMP kinase {ECO:0000255|HAMAP-Rule:MF_03172}
trEMBLtr|A0A0A0LB32|A0A0A0LB32_CUCSA6.00E-97Uncharacterized protein {ECO:0000313|EMBL:KGN57281.1}
TAIRAT4G252801.00E-80P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000185662111686017+
Transcript Sequence

Network for GWHGAAEX006067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00406.21ADK451973.60E-44
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13800CMPK1, UMPK Metabolic pathways map01100
Pyrimidine metabolismmap00240
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0006139Biological Processnucleobase-containing compound metabolic process
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic process
GO:0009041Molecular Functionuridylate kinase activity
GO:0005524Molecular FunctionATP binding
GO:0019205Molecular Functionnucleobase-containing compound kinase activity
GO:0004127Molecular Functioncytidylate kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.490
SRR2545915Juvenile tuber63.430
SRP108465SRR5643513five period of Gastrodia elata32.920
SRR5643514five period of Gastrodia elata25.610
SRR5643515five period of Gastrodia elata29.930
SRR5643524five period of Gastrodia elata25.110
SRR5643525five period of Gastrodia elata24.980
SRR5643528five period of Gastrodia elata30.630
SRR5643658five period of Gastrodia elata28.090
SRR5643659five period of Gastrodia elata28.550
SRR5643660five period of Gastrodia elata30.120
SRR5643661five period of Gastrodia elata28.470
SRR5643662five period of Gastrodia elata32.570
SRR5643663five period of Gastrodia elata31.170
SRR5643664five period of Gastrodia elata27.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.820
SRR6049655Rhizomagastrodiae_C368-T10_good_135.400
SRR6049656Rhizomagastrodiae_C368-T07_good_139.850
SRR6049657Rhizomagastrodiae_C368-T07_good_142.540
SRR6049658Rhizomagastrodiae_C368-T04_good_157.500
SRR6049659Rhizomagastrodiae_C368-T04_good_154.140
SRR6049660Rhizomagastrodiae_C368-T01_good_155.810
SRR6049661Rhizomagastrodiae_C368-T04_good_145.830
SRR6049662Rhizomagastrodiae_C368-T01_good_140.540
SRR6049663Rhizomagastrodiae_C368-T01_good_156.120
SRR6049664Rhizomagastrodiae_C368-T10_good_132.080
SRR6049665Rhizomagastrodiae_C368-T10_good_132.080
SRP279888GastroGastrodia elata tuber 67.22
JuvenJuvenile tuber41.21
Mother_GastroMother tuber of Gastrodia elata 45.93
Mother_JuvenMother tuber of Juvenile 46.44